RNA–Protein interactions for RNA: ENST00000614293.4

ABCA2-223, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5 BASIC

Gene ABCA2, Length 8,146 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-223	ENST00000614293	LCMT1	Q9UIC8	334 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	ARHGEF5	Q12774	1597 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	CYBB	P04839	570 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	TFAM	Q00059	246 aa	Known RBP	13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	CAPRIN1	Q14444	709 aa	Known RBP	13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	BRD3	Q15059	726 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	SLC10A5	Q5PT55	438 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	HOXB7	P09629	217 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	TYW1B	Q6NUM6	668 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	TRIM67	Q6ZTA4	783 aa		13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	THRAP3	Q9Y2W1	955 aa	Known RBP	13.15	□□□□□ -0.3
ABCA2-223	ENST00000614293	LRRD1	A4D1F6	860 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	PI4K2B	G5E9Z4	385 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	KRT8	P05787	483 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	CUL1	Q13616	776 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	ACCSL	Q4AC99	568 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLFN13	Q68D06	897 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	DEPDC1B	Q8WUY9	529 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	TRIM4	Q9C037	500 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	RPRD1B	Q9NQG5	326 aa	Known RBP	13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	POLK	Q9UBT6	870 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	NFU1	Q9UMS0	254 aa		13.15	□□□□□ -0.31
ABCA2-223	ENST00000614293	KDM5D	Q9BY66	1539 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	COPB2	P35606	906 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SCNN1D	P51172	638 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZFP42	Q96MM3	310 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ACAP3	Q96P50	834 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ARHGAP10	A1A4S6	786 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ALCAM	Q13740	583 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SENP1	Q9P0U3	644 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	IQCA1L	A6NCM1	817 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293		E5RI56	91 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	TEC	P42680	631 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ST8SIA6	P61647	398 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	BLID	Q8IZY5	108 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLAIN2	Q9P270	581 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SUN2	Q9UH99	717 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	TMEM232	C9JQI7	657 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	HIP1R	O75146	1068 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ARIH2	O95376	493 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	PPARA	Q07869	468 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SLFN12L	Q6IEE8	588 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SYT10	Q6XYQ8	523 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ATP8B1	O43520	1251 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	DEUP1	Q05D60	604 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	CCDC127	Q96BQ5	260 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	CCDC51	Q96ER9	411 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ASPSCR1	Q9BZE9	553 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	KIF17	Q9P2E2	1029 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ASXL2	Q76L83	1435 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF500	O60304	480 aa	Predicted RBP	13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	MMS22L	Q6ZRQ5	1243 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	PHF21A	Q96BD5	680 aa		13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	STN1	Q9H668	368 aa	Known RBP	13.14	□□□□□ -0.31
ABCA2-223	ENST00000614293	SKOR1	P84550	965 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	SNX1	Q13596	522 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	TMCO5A	Q8N6Q1	288 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293		E9PMD0	336 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF445	P59923	1031 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	IRAK1BP1	Q5VVH5	260 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	ASIC4	Q96FT7	647 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	UPF3A	Q9H1J1	476 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	TXLNG	Q9NUQ3	528 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	IKBKB	O14920	756 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	GSN	P06396	782 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	CTDSPL2	Q05D32	466 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	RRM2B	Q7LG56	351 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	LRRC47	Q8N1G4	583 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	EHD2	Q9NZN4	543 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	PRPF4	O43172	522 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	3e-7	■■■■□ 25.6
ABCA2-223	ENST00000614293	DDAH1	O94760	285 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	OR52Z1	P0C646	297 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	HOXC9	P31274	260 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	MAP3K10	Q02779	954 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	CARD6	Q9BX69	1037 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	DHX36	Q9H2U1	1008 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	VGLL3	A8MV65	326 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	CAPZA2	P47755	286 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	RABGGTA	Q92696	567 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	USP26	Q9BXU7	913 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	DDX41	Q9UJV9	622 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	STRIP2	Q9ULQ0	834 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	AOX1	Q06278	1338 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	ZNF202	O95125	648 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	EEF1G	P26641	437 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	CTNNA1	P35221	906 aa	Known RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	NLRP12	P59046	1061 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	TAF1B	Q53T94	588 aa	Predicted RBP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	ARMC6	Q6NXE6	501 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	KCNK3	O14649	394 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	MECOM	Q03112	1051 aa		13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	13.13	□□□□□ -0.31
ABCA2-223	ENST00000614293	PFDN1	O60925	122 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	ANP32D	O95626	131 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	FAM167A	Q96KS9	214 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	DNAJC5B	Q9UF47	199 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	KDM5C	P41229	1560 aa		13.12	□□□□□ -0.31
ABCA2-223	ENST00000614293	GOLGA8J	A6NMD2	632 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms