RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-223ENST00000612130 CDK5RAP3Q96JB5 506 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 PBKQ96KB5 322 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 POLD4Q9HCU8 107 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 MCM9Q9NXL9 1143 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 NIP7Q9Y221 180 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 NFS1Q9Y697 457 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 C5orf60A6NFR6 353 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 TMCO5BA8MYB1 307 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 KIF1CO43896 1103 aaKnown RBP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 HPDP32754 393 aaPredicted RBP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 MMP14P50281 582 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 FKBP3Q00688 224 aaKnown RBP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 HLTFQ14527 1009 aaKnown RBP eCLIP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 C10orf76Q5T2E6 689 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 C12orf60Q5U649 245 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 INTS5Q6P9B9 1019 aaKnown RBP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 GPIHBP1Q8IV16 184 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 ACTRT1Q8TDG2 376 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 CEP63Q96MT8 703 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 PNMA5Q96PV4 448 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 LSM14BQ9BX40 385 aaKnown RBP15.1■□□□□ 0.01
UBE2F-223ENST00000612130 NLRC4Q9NPP4 1024 aa15.1■□□□□ 0.01
UBE2F-223ENST00000612130 GNA14O95837 355 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 SEPT2Q15019 361 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 IFI16Q16666 785 aaKnown RBP15.09■□□□□ 0.01
UBE2F-223ENST00000612130 KIAA0753Q2KHM9 967 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 TMEM266Q2M3C6 531 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 SCFD2Q8WU76 684 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 TBC1D5Q92609 795 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 RAD54LQ92698 747 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 MTMR9Q96QG7 549 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 RAB34Q9BZG1 259 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 CD248Q9HCU0 757 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 PPANQ9NQ55 473 aaKnown RBP15.09■□□□□ 0.01
UBE2F-223ENST00000612130 DONSONQ9NYP3 566 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 AIPL1Q9NZN9 384 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 MCM8Q9UJA3 840 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 ATP8B3O60423 1300 aa15.09■□□□□ 0.01
UBE2F-223ENST00000612130 ESYT2A0FGR8 921 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 SMCO2A6NFE2 343 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 DNA2P51530 1060 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 USP11P51784 963 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 MARSP56192 900 aaKnown RBP15.08■□□□□ 0.01
UBE2F-223ENST00000612130 ZNF844Q08AG5 666 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 RPS6KA1Q15418 735 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 UAP1Q16222 522 aaPredicted RBP15.08■□□□□ 0.01
UBE2F-223ENST00000612130 WLSQ5T9L3 541 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 KLHL7Q8IXQ5 586 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 MYOCDQ8IZQ8 938 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 MAGEC3Q8TD91 643 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 TBCKQ8TEA7 893 aa15.08■□□□□ 0.01
UBE2F-223ENST00000612130 DDX20Q9UHI6 824 aaKnown RBP15.08■□□□□ 0.01
UBE2F-223ENST00000612130 ATAD5Q96QE3 1844 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 KIF4AO95239 1232 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 USP17L8P0C7I0 530 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 CTNNA1P35221 906 aaKnown RBP15.08■□□□□ 0
UBE2F-223ENST00000612130 POLR2FP61218 127 aaKnown RBP15.08■□□□□ 0
UBE2F-223ENST00000612130 PPP2R2AP63151 447 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 SF3B3Q15393 1217 aaKnown RBP15.08■□□□□ 0
UBE2F-223ENST00000612130 TRADDQ15628 312 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 CALCRLQ16602 461 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 TMEM119Q4V9L6 283 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 SOGA3Q5TF21 947 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 DYMQ7RTS9 669 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 CCDC114Q96M63 670 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 PACSIN2Q9UNF0 486 aaPredicted RBP15.08■□□□□ 0
UBE2F-223ENST00000612130 MINPP1Q9UNW1 487 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 CCDC88AQ3V6T2 1871 aa15.08■□□□□ 0
UBE2F-223ENST00000612130 A0A087X0T9 212 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 KLRF2D3W0D1 207 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 CCDC188H7C350 402 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 FAM228BP0C875 321 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 TSPY3P0CV98 308 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 TSPY8P0CW00 308 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 TXKP42681 527 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 KLHL30Q0D2K2 578 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 RAPGEF1Q13905 1077 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 SNCBQ16143 134 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 ASIC2Q16515 512 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 LACTB2Q53H82 288 aaPredicted RBP15.07■□□□□ 0
UBE2F-223ENST00000612130 ANKRD20A8PQ5CZ79 823 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 TRIM59Q8IWR1 403 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 REXO1Q8N1G1 1221 aaKnown RBP15.07■□□□□ 0
UBE2F-223ENST00000612130 WTIPA6NIX2 430 aaPredicted RBP15.07■□□□□ 0
UBE2F-223ENST00000612130 PGRMC1O00264 195 aaKnown RBP15.07■□□□□ 0
UBE2F-223ENST00000612130 KCNK3O14649 394 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 ZPR1O75312 459 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 PDIA5Q14554 519 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 DDX12PQ92771 950 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 SGSM3Q96HU1 749 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 TMEM47Q9BQJ4 181 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 MKNK2Q9HBH9 465 aa15.07■□□□□ 0
UBE2F-223ENST00000612130 USP17L3A6NCW0 530 aa15.06■□□□□ 0
UBE2F-223ENST00000612130 USP17L4A6NCW7 530 aa15.06■□□□□ 0
UBE2F-223ENST00000612130 hCG_1984214I3L0E3 225 aa15.06■□□□□ 0
UBE2F-223ENST00000612130 CHRM1P11229 460 aaPredicted RBP15.06■□□□□ 0
UBE2F-223ENST00000612130 SMARCA1P28370 1054 aa15.06■□□□□ 0
UBE2F-223ENST00000612130 PRDX5P30044 214 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms