RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 SPOCK2Q92563 424 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 TEKT1Q969V4 418 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 LRRIQ3A6PVS8 624 aaPredicted RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 TIMM44O43615 452 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 PLCG1P19174 1290 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 HERVK_113P62684 666 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 PDE4DQ08499 809 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 IRF5Q13568 498 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 NFIXQ14938 502 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 SFMBT2Q5VUG0 894 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 USP17L2Q6R6M4 530 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 DYMQ7RTS9 669 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 CLEC10AQ8IUN9 316 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 ANKRD13CQ8N6S4 541 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 MB21D1Q8N884 522 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 C3orf20Q8ND61 904 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 CAGE1Q8TC20 777 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 SLC39A2Q9NP94 309 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 A1CFQ9NQ94 594 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 LMNB1P20700 586 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 MTIF2P46199 727 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 TRAPPC10P48553 1259 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 STK4Q13043 487 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 CASP8Q14790 479 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 TSR1Q2NL82 804 aaKnown RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 WDR59Q6PJI9 974 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 POLR3CQ9BUI4 534 aaPredicted RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 JADE2Q9NQC1 790 aa11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 MAGEC2Q9UBF1 373 aaPredicted RBP11.82□□□□□ -0.52
PCDHGC3-202ENST00000611950 CXCR5P32302 372 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 KIF5BP33176 963 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 NAPAP54920 295 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 CORO7P57737 925 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 ZBED6P86452 979 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 ENOX2Q16206 610 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 ADSSL1Q8N142 457 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 OR8K1Q8NGG5 319 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 FAM207AQ9NSI2 230 aaPredicted RBP11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 EHD2Q9NZN4 543 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 PCDHA6Q9UN73 950 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 PCDHA4Q9UN74 947 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 PCDHA8Q9Y5H6 950 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 SERPINB2P05120 415 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 MYL1P05976 194 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 RDXP35241 583 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 BRD3Q15059 726 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 GBP6Q6ZN66 633 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 TTLL6Q8N841 843 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 DUSP9Q99956 384 aaKnown RBP11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 TUBGCP2Q9BSJ2 902 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 TRAIPQ9BWF2 469 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 KANSL2Q9H9L4 492 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 TMEM260Q9NX78 707 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 ZNF219Q9P2Y4 722 aaPredicted RBP11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 MAD2L2Q9UI95 211 aa11.81□□□□□ -0.52
PCDHGC3-202ENST00000611950 GLTPD2A6NH11 291 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 LDHBP07195 334 aaKnown RBP11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 TXKP42681 527 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 RAB27AP51159 221 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 C2orf54Q08AI8 447 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 NEDD9Q14511 834 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 ANKRD40Q6AI12 368 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 HDXQ7Z353 690 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 DGKHQ86XP1 1220 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 C2CD5Q86YS7 1000 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 ANKRD13AQ8IZ07 590 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 HS6ST3Q8IZP7 471 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 CCDC155Q8N6L0 562 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 UBXN6Q9BZV1 441 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 UNC45AQ9H3U1 944 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 POLD4Q9HCU8 107 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 M0R2N6 131 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 PSMA7O14818 248 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 ERLIN1O75477 346 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 IDEP14735 1019 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 SPAG1Q07617 926 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 GRM4Q14833 912 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 TTC30BQ8N4P2 665 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 RETREG2Q8NC44 543 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 CNOT6LQ96LI5 555 aaKnown RBP11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 RMND1Q9NWS8 449 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 L1RE1Q9UN81 338 aa11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 FRMPD2Q68DX3 1309 aaPredicted RBP11.8□□□□□ -0.52
PCDHGC3-202ENST00000611950 MYH10P35580 1976 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 LGALS16A8MUM7 142 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 MAP2K7O14733 419 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 KLRC4O43908 158 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 STK10O94804 968 aaKnown RBP11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 CALML3P27482 149 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 LONP1P36776 959 aaKnown RBP11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 PRELPP51888 382 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 LRRC41Q15345 812 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ACBD5Q5T8D3 534 aaPredicted RBP11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 SAPCD2Q86UD0 394 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 CABP7Q86V35 215 aa11.79□□□□□ -0.52
PCDHGC3-202ENST00000611950 ZNF444Q8N0Y2 327 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms