RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 AMHP03971 560 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 SMIM10L2AP0DMW4 78 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 SMIM10L2BP0DMW5 78 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 HOXD8P13378 290 aaPredicted RBP15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 GHRHRQ02643 423 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 TRAF1Q13077 416 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 CATIPQ7Z7H3 387 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 SERINC5Q86VE9 423 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 FBXO22Q8NEZ5 403 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 NCOA7Q8NI08 942 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 C17orf80Q9BSJ5 609 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 C16orf70Q9BSU1 422 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 MYL10Q9BUA6 226 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 TUT1Q9H6E5 874 aaKnown RBP15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 SUGCTQ9HAC7 445 aa15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 MAP3K20Q9NYL2 800 aaKnown RBP15.44■□□□□ 0.06
HMGB1P24-201ENST00000611897 PNMA6FA0A0J9YX94 578 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 E7EWF7 191 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 UPP2O95045 317 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 CYFIP1Q7L576 1253 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 SMARCC2Q8TAQ2 1214 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 YME1L1Q96TA2 773 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 RIOX1Q9H6W3 641 aa15.43■□□□□ 0.06
HMGB1P24-201ENST00000611897 MYO7AQ13402 2215 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 TGFB3P10600 412 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 CHMLP26374 656 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 ERVK-21P61565 698 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 IRX6P78412 446 aaPredicted RBP15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 EP400NLQ6ZTU2 488 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 SEPT8Q92599 483 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 CUL5Q93034 780 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 SETD4Q9NVD3 440 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 INSL6Q9Y581 213 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 NLRC5Q86WI3 1866 aa15.42■□□□□ 0.06
HMGB1P24-201ENST00000611897 FIBPO43427 364 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 CSPG5O95196 566 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 KCNA5P22460 613 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 MRPS9P82933 396 aaKnown RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 ARHGAP4P98171 946 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 TROAPQ12815 778 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 USP17L6PQ6QN14 398 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 METTL7BQ6UX53 244 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 NFXL1Q6ZNB6 911 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 SAMD3Q8N6K7 520 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 CTCFLQ8NI51 663 aaPredicted RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 RRP36Q96EU6 259 aaKnown RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 OSBPL7Q9BZF2 842 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 RNPEPQ9H4A4 650 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 EPHX3Q9H6B9 360 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 UBE2ZQ9H832 354 aaPredicted RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 PKD2L1Q9P0L9 805 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 SEC63Q9UGP8 760 aaKnown RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 ZNF215Q9UL58 517 aaPredicted RBP15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 TELO2Q9Y4R8 837 aa15.41■□□□□ 0.06
HMGB1P24-201ENST00000611897 ANTXR2P58335 489 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 SEMA3FQ13275 785 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 NEDD9Q14511 834 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 PLEKHG4Q58EX7 1191 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 RAB11FIP4Q86YS3 637 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 ZNF654Q8IZM8 581 aa15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 INPP4AQ96PE3 977 aaPredicted RBP15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 IFIH1Q9BYX4 1025 aaKnown RBP15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 SUPT16HQ9Y5B9 1047 aaKnown RBP15.4■□□□□ 0.06
HMGB1P24-201ENST00000611897 FAM86C2PA6NEL3 165 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 GNAT1P11488 350 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 RXRAP19793 462 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 MARK3P27448 753 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 CASC1Q6TDU7 716 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 LMBR1Q8WVP7 490 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 GPR20Q99678 358 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 USP26Q9BXU7 913 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 LMCD1Q9NZU5 365 aa15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 RBM8AQ9Y5S9 174 aaKnown RBP15.39■□□□□ 0.05
HMGB1P24-201ENST00000611897 SPATA31C2B4DYI2 1134 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 PRC1O43663 620 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 STAM2O75886 525 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 PLEKHA8P1O95397 391 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 GHRP10912 638 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 SSTR3P32745 418 aaPredicted RBP15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 KIF5BP33176 963 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 MB21D2Q8IYB1 491 aaPredicted RBP15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 CMTR1Q8N1G2 835 aaKnown RBP15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 KHSRPQ92945 711 aaKnown RBP eCLIP15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 FAM122AQ96E09 287 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 FRMPD4Q14CM0 1322 aa15.38■□□□□ 0.05
HMGB1P24-201ENST00000611897 hCG_1642624A0A1W2PR95 340 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 SGSM2O43147 1006 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 DDAH1O94760 285 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 HOXC8P31273 242 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 ICAM3P32942 547 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 HTRA4P83105 476 aaPredicted RBP15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 UBE2SQ16763 222 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 PTPROQ16827 1216 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 EPC2Q52LR7 807 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 PCNX4Q63HM2 1172 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 NLRX1Q86UT6 975 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 CCDC82Q8N4S0 544 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 SPZ1Q9BXG8 430 aa15.37■□□□□ 0.05
HMGB1P24-201ENST00000611897 LY9Q9HBG7 655 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms