RNA–Protein interactions for RNA: ENST00000610454.4

SENP3-209, Transcript of SUMO specific peptidase 3, humanhuman

TSL 3

Gene SENP3, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-209ENST00000610454 NOC4LQ9BVI4 516 aaKnown RBP15.29■□□□□ 0.04
SENP3-209ENST00000610454 JADE2Q9NQC1 790 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 TMEM260Q9NX78 707 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 PKD2L1Q9P0L9 805 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 ZNF215Q9UL58 517 aaPredicted RBP15.29■□□□□ 0.04
SENP3-209ENST00000610454 UBIAD1Q9Y5Z9 338 aa15.29■□□□□ 0.04
SENP3-209ENST00000610454 H3BRB1 525 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 LGALS2P05162 132 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 HOXD8P13378 290 aaPredicted RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 SREBF1P36956 1147 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 CLK2P49760 499 aaKnown RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 CCL23P55773 120 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 NLRP5P59047 1200 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 ARHGAP4P98171 946 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 C9orf50Q5SZB4 431 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 PSRC1Q6PGN9 363 aaPredicted RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 SESTD1Q86VW0 696 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 LRCH3Q96II8 777 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 MXRA8Q9BRK3 442 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 SDF4Q9BRK5 362 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 MTIF3Q9H2K0 278 aaKnown RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 TUT1Q9H6E5 874 aaKnown RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 SH3GLB2Q9NR46 395 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 VPS54Q9P1Q0 977 aa15.28■□□□□ 0.04
SENP3-209ENST00000610454 LAMA2P24043 3122 aaKnown RBP15.28■□□□□ 0.04
SENP3-209ENST00000610454 UMODL1Q5DID0 1318 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 SOX1O00570 391 aaPredicted RBP15.27■□□□□ 0.04
SENP3-209ENST00000610454 XBP1P17861 261 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 NEK4P51957 841 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 AK2P54819 239 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 CEP55Q53EZ4 464 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 UTP14CQ5TAP6 766 aaKnown RBP15.27■□□□□ 0.04
SENP3-209ENST00000610454 GDF6Q6KF10 455 aaPredicted RBP15.27■□□□□ 0.04
SENP3-209ENST00000610454 RPUSD2Q8IZ73 545 aaKnown RBP15.27■□□□□ 0.04
SENP3-209ENST00000610454 GPR20Q99678 358 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 IL23AQ9NPF7 189 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 GTF2IRD1Q9UHL9 959 aa15.27■□□□□ 0.04
SENP3-209ENST00000610454 HAS3O00219 553 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 PITPNM1O00562 1244 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 SEC24BO95487 1268 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 KCNA2P16389 499 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 EPHB4P54760 987 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 SCRN1Q12765 414 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 CAGE1Q8TC20 777 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.26■□□□□ 0.033e-6■■■■■ 29.7
SENP3-209ENST00000610454 C16orf70Q9BSU1 422 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 BCAS3Q9H6U6 928 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 JPH1Q9HDC5 661 aaPredicted RBP15.26■□□□□ 0.03
SENP3-209ENST00000610454 KCNH7Q9NS40 1196 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 TCEAL9Q9UHQ7 104 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 TPCN1Q9ULQ1 816 aa15.26■□□□□ 0.03
SENP3-209ENST00000610454 TANC1Q9C0D5 1861 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 PFKFB2O60825 505 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 ATP9AO75110 1047 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 ACRP10323 421 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 GNAT1P11488 350 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 TCF7P36402 384 aaPredicted RBP15.25■□□□□ 0.03
SENP3-209ENST00000610454 GPR153Q6NV75 609 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 NIPA1Q7RTP0 329 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 FAM177A1Q8N128 213 aaPredicted RBP15.25■□□□□ 0.03
SENP3-209ENST00000610454 SEPT1Q8WYJ6 367 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 IL17RAQ96F46 866 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 SCLYQ96I15 445 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 C22orf23Q9BZE7 217 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 WNT8AQ9H1J5 351 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 UPF2Q9HAU5 1272 aaKnown RBP15.25■□□□□ 0.03
SENP3-209ENST00000610454 SLC9A2Q9UBY0 812 aa15.25■□□□□ 0.03
SENP3-209ENST00000610454 KAT6AQ92794 2004 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 C17orf102A2RUQ5 167 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 FGBP02675 491 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 PFKMP08237 780 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 RFC2P35250 354 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 SETQ01105 290 aaPredicted RBP15.24■□□□□ 0.03
SENP3-209ENST00000610454 GALNT17Q6IS24 598 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 ZNF365Q70YC5 407 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 PLA2G4DQ86XP0 818 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 TRIM50Q86XT4 487 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 CYP2W1Q8TAV3 490 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 RASGRP4Q8TDF6 673 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 AFAP1L1Q8TED9 768 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 WASF1Q92558 559 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 GLG1Q92896 1179 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 AZI2Q9H6S1 392 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 PCDHA4Q9UN74 947 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 SZT2Q5T011 3432 aa15.24■□□□□ 0.03
SENP3-209ENST00000610454 TRIP12Q14669 1992 aaPredicted RBP15.24■□□□□ 0.03
SENP3-209ENST00000610454 NFASCO94856 1347 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 STK36Q9NRP7 1315 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 MEIS1O00470 390 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 CYP3A4P08684 503 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 SMIM10L2AP0DMW4 78 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 SMIM10L2BP0DMW5 78 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 ACTN1P12814 892 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 PTK7Q13308 1070 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 C8orf34Q49A92 452 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 TMEM240Q5SV17 173 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 DEFB128Q7Z7B8 93 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 ATP6V0A1Q93050 837 aa15.23■□□□□ 0.03
SENP3-209ENST00000610454 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms