RNA–Protein interactions for RNA: ENST00000607020.5

SSBP4-214, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 504 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-214ENST00000607020 PDE1AP54750 535 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 BMP8AQ7Z5Y6 402 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 RPAINQ86UA6 219 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 MTMR8Q96EF0 704 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 IL17RAQ96F46 866 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 AMNQ9BXJ7 453 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 IFIH1Q9BYX4 1025 aaKnown RBP17.44■□□□□ 0.38
SSBP4-214ENST00000607020 OSBPL7Q9BZF2 842 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 RNPEPQ9H4A4 650 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 RWDD3Q9Y3V2 267 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 NEDD4P46934 1319 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 CCDC171Q6TFL3 1326 aa17.44■□□□□ 0.38
SSBP4-214ENST00000607020 UPP2O95045 317 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 PARP1P09874 1014 aaKnown RBP17.43■□□□□ 0.38
SSBP4-214ENST00000607020 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 GNAT1P11488 350 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
SSBP4-214ENST00000607020 EP400NLQ6ZTU2 488 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 ZSCAN10Q96SZ4 725 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-214ENST00000607020 C11orf84Q9BUA3 381 aaPredicted RBP17.43■□□□□ 0.38
SSBP4-214ENST00000607020 USP26Q9BXU7 913 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 MLXIPQ9HAP2 919 aa17.43■□□□□ 0.38
SSBP4-214ENST00000607020 ZNF213O14771 459 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 MBTPS2O43462 519 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 MYCLP12524 364 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-214ENST00000607020 MFAP1P55081 439 aaKnown RBP17.42■□□□□ 0.38
SSBP4-214ENST00000607020 ADAM17P78536 824 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 HYAL1Q12794 435 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
SSBP4-214ENST00000607020 PGM5Q15124 567 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 FIBCD1Q8N539 461 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 EDAQ92838 391 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 CLP1Q92989 425 aaKnown RBP17.42■□□□□ 0.38
SSBP4-214ENST00000607020 VAT1LQ9HCJ6 419 aa17.42■□□□□ 0.38
SSBP4-214ENST00000607020 KDM4AO75164 1064 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 LGALS2P05162 132 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 SMAD4Q13485 552 aaKnown RBP17.41■□□□□ 0.38
SSBP4-214ENST00000607020 PKN1Q16512 942 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 ANKRD45Q5TZF3 282 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 RNF135Q8IUD6 432 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 ENAHQ8N8S7 591 aaPredicted RBP17.41■□□□□ 0.38
SSBP4-214ENST00000607020 RC3H2Q9HBD1 1191 aaKnown RBP17.41■□□□□ 0.38
SSBP4-214ENST00000607020 ZBTB47Q9UFB7 747 aaPredicted RBP17.41■□□□□ 0.38
SSBP4-214ENST00000607020 SIP14410 1827 aa17.41■□□□□ 0.38
SSBP4-214ENST00000607020 ZBTB5O15062 677 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 GRM6O15303 877 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 DHX16O60231 1041 aaKnown RBP17.4■□□□□ 0.38
SSBP4-214ENST00000607020 PPP1R11O60927 126 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-214ENST00000607020 CCND2P30279 289 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 ICAM3P32942 547 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 CTNNB1P35222 781 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 DLX2Q07687 328 aaPredicted RBP17.4■□□□□ 0.38
SSBP4-214ENST00000607020 ADAM15Q13444 863 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 IL31RAQ8NI17 732 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 SNX27Q96L92 541 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 PLVAPQ9BX97 442 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 EHMT1Q9H9B1 1298 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 MUTYHQ9UIF7 546 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 PCDHA1Q9Y5I3 950 aa17.4■□□□□ 0.38
SSBP4-214ENST00000607020 SORBS3O60504 671 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 STAM2O75886 525 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 EYA4O95677 639 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 CTSHP09668 335 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 TRAF1Q13077 416 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 NEDD9Q14511 834 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 METTL7BQ6UX53 244 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 GPKOWQ92917 476 aaPredicted RBP eCLIP17.39■□□□□ 0.37
SSBP4-214ENST00000607020 ZNF689Q96CS4 500 aaPredicted RBP17.39■□□□□ 0.37
SSBP4-214ENST00000607020 PRRX2Q99811 253 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 SETD4Q9NVD3 440 aa17.39■□□□□ 0.37
SSBP4-214ENST00000607020 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-214ENST00000607020 MMP1P03956 469 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 POLR2MP0CAP2 368 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 HOXA13P31271 388 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-214ENST00000607020 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
SSBP4-214ENST00000607020 STAG2Q8N3U4 1231 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 MSLNLQ96KJ4 702 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 INPP4AQ96PE3 977 aaPredicted RBP17.38■□□□□ 0.37
SSBP4-214ENST00000607020 GPR20Q99678 358 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 BCAS3Q9H6U6 928 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 CD207Q9UJ71 328 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 ZNF318Q5VUA4 2279 aa17.38■□□□□ 0.37
SSBP4-214ENST00000607020 WDFY4Q6ZS81 3184 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 SPATA31C2B4DYI2 1134 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 B4E1Z4 1266 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 KLRF2D3W0D1 207 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 STXBP3O00186 592 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 NOP56O00567 594 aaKnown RBP17.37■□□□□ 0.37
SSBP4-214ENST00000607020 ENPP3O14638 875 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 CHRNA1P02708 482 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 PTPN5P54829 565 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 CAMK1Q14012 370 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 GNPTABQ3T906 1256 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 NAALADL2Q58DX5 795 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 P2RX5Q93086 422 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 ADGRA3Q8IWK6 1321 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 NRCAMQ92823 1304 aa17.37■□□□□ 0.37
SSBP4-214ENST00000607020 PALM3A6NDB9 673 aaPredicted RBP17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms