RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 SMIM10L2BP0DMW5 78 aa8.78□□□□□ -1
CUX1-219ENST00000606749 CALM1P0DP23 149 aa8.78□□□□□ -1
CUX1-219ENST00000606749 CALM2P0DP24 149 aa8.78□□□□□ -1
CUX1-219ENST00000606749 CALM3P0DP25 149 aa8.78□□□□□ -1
CUX1-219ENST00000606749 RXRAP19793 462 aa8.78□□□□□ -1
CUX1-219ENST00000606749 POU3F3P20264 500 aaPredicted RBP8.78□□□□□ -1
CUX1-219ENST00000606749 HOXC8P31273 242 aa8.78□□□□□ -1
CUX1-219ENST00000606749 KCNJ6P48051 423 aa8.78□□□□□ -1
CUX1-219ENST00000606749 IKBKEQ14164 716 aa8.78□□□□□ -1
CUX1-219ENST00000606749 MBTPS1Q14703 1052 aa8.78□□□□□ -1
CUX1-219ENST00000606749 XRRA1Q6P2D8 792 aa8.78□□□□□ -1
CUX1-219ENST00000606749 METTL7BQ6UX53 244 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SERINC5Q86VE9 423 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SKAP1Q86WV1 359 aa8.78□□□□□ -1
CUX1-219ENST00000606749 CCDC82Q8N4S0 544 aa8.78□□□□□ -1
CUX1-219ENST00000606749 FANCBQ8NB91 859 aa8.78□□□□□ -1
CUX1-219ENST00000606749 ATP6V0A1Q93050 837 aa8.78□□□□□ -1
CUX1-219ENST00000606749 ASB2Q96Q27 587 aa8.78□□□□□ -1
CUX1-219ENST00000606749 GPR20Q99678 358 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SENP7Q9BQF6 1050 aa8.78□□□□□ -1
CUX1-219ENST00000606749 LRRC2Q9BYS8 371 aa8.78□□□□□ -1
CUX1-219ENST00000606749 RNPEPQ9H4A4 650 aa8.78□□□□□ -1
CUX1-219ENST00000606749 PSTPIP2Q9H939 334 aa8.78□□□□□ -1
CUX1-219ENST00000606749 CERS4Q9HA82 394 aa8.78□□□□□ -1
CUX1-219ENST00000606749 ANO2Q9NQ90 1003 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SEC63Q9UGP8 760 aaKnown RBP8.78□□□□□ -1
CUX1-219ENST00000606749 TELO2Q9Y4R8 837 aa8.78□□□□□ -1
CUX1-219ENST00000606749 SLC12A7Q9Y666 1083 aa8.78□□□□□ -1
CUX1-219ENST00000606749 REV3LO60673 3130 aa8.78□□□□□ -1
CUX1-219ENST00000606749 hCG_1642624A0A1W2PR95 340 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 C17orf102A2RUQ5 167 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 RSPH10B2B2RC85 870 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 TREHO43280 583 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 RSPH10BP0C881 870 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 THPOP40225 353 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 DEFB103AP81534 67 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 MRPS5P82675 430 aaKnown RBP8.77□□□□□ -1.01
CUX1-219ENST00000606749 EXOSC10Q01780 885 aaKnown RBP8.77□□□□□ -1.01
CUX1-219ENST00000606749 BMP2KLQ5H9B9 411 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 TMCO2Q7Z6W1 182 aaPredicted RBP8.77□□□□□ -1.01
CUX1-219ENST00000606749 SGMS1Q86VZ5 419 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 RAB11FIP4Q86YS3 637 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 RAD9AQ99638 391 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 ZBED2Q9BTP6 218 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 THEGQ9P2T0 379 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 MTCH2Q9Y6C9 303 aa8.77□□□□□ -1.01
CUX1-219ENST00000606749 LCHNA4D1U4 455 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 EFCAB14O75071 495 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 ATP9AO75110 1047 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 LGR5O75473 907 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 GJB5O95377 273 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 GNAT1P11488 350 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 ITGB5P18084 799 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 ADAM17P78536 824 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 TSGA10IPQ3SY00 556 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 UTP14CQ5TAP6 766 aaKnown RBP8.76□□□□□ -1.01
CUX1-219ENST00000606749 RNF20Q5VTR2 975 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 KRT40Q6A162 431 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 SYNE3Q6ZMZ3 975 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.76□□□□□ -1.011e-8■■■■□ 26.3
CUX1-219ENST00000606749 TMTC3Q6ZXV5 915 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 CENPQQ7L2Z9 268 aaPredicted RBP8.76□□□□□ -1.01
CUX1-219ENST00000606749 SPRED2Q7Z698 418 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 NLRX1Q86UT6 975 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 MICALL1Q8N3F8 863 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 GIMAP8Q8ND71 665 aaPredicted RBP8.76□□□□□ -1.01
CUX1-219ENST00000606749 DBF4BQ8NFT6 615 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 ARNTL2Q8WYA1 636 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 NEK1Q96PY6 1258 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 OSBPL7Q9BZF2 842 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 TSPYL2Q9H2G4 693 aaPredicted RBP8.76□□□□□ -1.01
CUX1-219ENST00000606749 SETD4Q9NVD3 440 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 EMSYQ7Z589 1322 aa8.76□□□□□ -1.01
CUX1-219ENST00000606749 TANC1Q9C0D5 1861 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 MAFGO15525 162 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 GTPBP6O43824 516 aaPredicted RBP8.75□□□□□ -1.01
CUX1-219ENST00000606749 LPXNO60711 386 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 KCNA2P16389 499 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 SP4Q02446 784 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 FUT2Q10981 343 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 MKRN4PQ13434 485 aaPredicted RBP8.75□□□□□ -1.01
CUX1-219ENST00000606749 UBE2SQ16763 222 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 ADCK5Q3MIX3 580 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 PLEKHG4Q58EX7 1191 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 APOA5Q6Q788 366 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 DHX32Q7L7V1 743 aaKnown RBP8.75□□□□□ -1.01
CUX1-219ENST00000606749 HEATR3Q7Z4Q2 680 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 MICU3Q86XE3 530 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 TRIM50Q86XT4 487 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 RASEFQ8IZ41 740 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 SEPT1Q8WYJ6 367 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 GPRASP2Q96D09 838 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 CDHR1Q96JP9 859 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 JADE2Q9NQC1 790 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 ZNF215Q9UL58 517 aaPredicted RBP8.75□□□□□ -1.01
CUX1-219ENST00000606749 BRPF3Q9ULD4 1205 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 PCDHA6Q9UN73 950 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 PCDHA8Q9Y5H6 950 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 UBIAD1Q9Y5Z9 338 aa8.75□□□□□ -1.01
CUX1-219ENST00000606749 NRCAMQ92823 1304 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms