RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 KCNA2P16389 499 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 KCNA4P22459 653 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 CLK2P49760 499 aaKnown RBP14.09□□□□□ -0.15
CTSA-210ENST00000606000 EVCP57679 992 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 GPR153Q6NV75 609 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 METTL7BQ6UX53 244 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 OTOP2Q7RTS6 562 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 DEFB128Q7Z7B8 93 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 NLRX1Q86UT6 975 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 SESTD1Q86VW0 696 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 C7orf31Q8N865 590 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 CYP2W1Q8TAV3 490 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 KATNAL1Q9BW62 490 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 MTMR10Q9NXD2 777 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 NOD1Q9Y239 953 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 CYP46A1Q9Y6A2 500 aa14.09□□□□□ -0.15
CTSA-210ENST00000606000 CCDC196A0A1B0GTZ2 297 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 hCG_1984214I3L0E3 225 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 NOP56O00567 594 aaKnown RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 PRPF3O43395 683 aaKnown RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 PPFIA4O75335 1185 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 PBX2P40425 430 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 STK3Q13188 491 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 MTMR1Q13613 665 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 NEDD9Q14511 834 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 UTP14CQ5TAP6 766 aaKnown RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 RASIP1Q5U651 963 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 JAKMIP3Q5VZ66 844 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 XRRA1Q6P2D8 792 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 PSRC1Q6PGN9 363 aaPredicted RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 ZNF713Q8N859 430 aaPredicted RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 GPRASP2Q96D09 838 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.16
CTSA-210ENST00000606000 TTYH1Q9H313 450 aaPredicted RBP14.08□□□□□ -0.16
CTSA-210ENST00000606000 PTPRSQ13332 1948 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 TRIP12Q14669 1992 aaPredicted RBP14.07□□□□□ -0.16
CTSA-210ENST00000606000 SEC24BO95487 1268 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 IQCF3P0C7M6 154 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 SMAD3P84022 425 aaKnown RBP14.07□□□□□ -0.16
CTSA-210ENST00000606000 ZNF697Q5TEC3 545 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 RASGRP4Q8TDF6 673 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 HERVK_113Q902F9 699 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 GUCD1Q96NT3 240 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 TM6SF1Q9BZW5 370 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 JADE2Q9NQC1 790 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 PDRG1Q9NUG6 133 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 VPS54Q9P1Q0 977 aa14.07□□□□□ -0.16
CTSA-210ENST00000606000 H3BRB1 525 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 PITPNM1O00562 1244 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 FGBP02675 491 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 ARP10275 920 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 IFNAR1P17181 557 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 GPNMBQ14956 572 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 UIMC1Q96RL1 719 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 MXRA8Q9BRK3 442 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 RNF26Q9BY78 433 aaPredicted RBP14.06□□□□□ -0.16
CTSA-210ENST00000606000 TUT1Q9H6E5 874 aaKnown RBP14.06□□□□□ -0.16
CTSA-210ENST00000606000 SIP14410 1827 aa14.06□□□□□ -0.16
CTSA-210ENST00000606000 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.05□□□□□ -0.16
CTSA-210ENST00000606000 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.05□□□□□ -0.16
CTSA-210ENST00000606000 GSTTP1A0A1W2PQM5 241 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 SMIM10L2AP0DMW4 78 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 SMIM10L2BP0DMW5 78 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 CKBP12277 381 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 DNAJB2P25686 324 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
CTSA-210ENST00000606000 SREBF1P36956 1147 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 AP3B2Q13367 1082 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 BFSP2Q13515 415 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 TCTN1Q2MV58 587 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 TRIM71Q2Q1W2 868 aaKnown RBP14.05□□□□□ -0.16
CTSA-210ENST00000606000 TRAF7Q6Q0C0 670 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 LRRC8DQ7L1W4 858 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 RETREG2Q8NC44 543 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 AIFM3Q96NN9 605 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 PBX4Q9BYU1 374 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 ZMYND12Q9H0C1 365 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 EHMT1Q9H9B1 1298 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 KCNH7Q9NS40 1196 aa14.05□□□□□ -0.16
CTSA-210ENST00000606000 ESYT2A0FGR8 921 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 C17orf102A2RUQ5 167 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 ZBBXA8MT70 800 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 FAM86B1E9PN63 330 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 DDX39AO00148 427 aaKnown RBP14.04□□□□□ -0.16
CTSA-210ENST00000606000 TREHO43280 583 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 FAM86B2P0C5J1 330 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 MARK3P27448 753 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 RABGGTBP53611 331 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 ARHGAP4P98171 946 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 AKAP17AQ02040 695 aaKnown RBP14.04□□□□□ -0.16
CTSA-210ENST00000606000 PTK7Q13308 1070 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 ITGB3BPQ13352 177 aaPredicted RBP14.04□□□□□ -0.16
CTSA-210ENST00000606000 ZNF618Q5T7W0 954 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 CAGE1Q8TC20 777 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 CRYGNQ8WXF5 182 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 RNPEPQ9H4A4 650 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 SETD4Q9NVD3 440 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 TPCN1Q9ULQ1 816 aa14.04□□□□□ -0.16
CTSA-210ENST00000606000 NBNO60934 754 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms