RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 ZMYND12Q9H0C1 365 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 JADE2Q9NQC1 790 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 TELO2Q9Y4R8 837 aa16.47■□□□□ 0.23
TUBE1-208ENST00000604743 ESYT2A0FGR8 921 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 CSF2RAP15509 400 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 NLRP5P59047 1200 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 PTPN11Q06124 597 aaPredicted RBP16.46■□□□□ 0.23
TUBE1-208ENST00000604743 KIAA0753Q2KHM9 967 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 UTP14CQ5TAP6 766 aaKnown RBP16.46■□□□□ 0.23
TUBE1-208ENST00000604743 REXO1Q8N1G1 1221 aaKnown RBP16.46■□□□□ 0.23
TUBE1-208ENST00000604743 C7orf31Q8N865 590 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 MXRA8Q9BRK3 442 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 NOC4LQ9BVI4 516 aaKnown RBP16.46■□□□□ 0.23
TUBE1-208ENST00000604743 HDAC6Q9UBN7 1215 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 SCN5AQ14524 2016 aa16.46■□□□□ 0.23
TUBE1-208ENST00000604743 PFKFB2O60825 505 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 DEXIO95424 95 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 F2P00734 622 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 LGALS2P05162 132 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 ACRP10323 421 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 KCNA2P16389 499 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 SREBF1P36956 1147 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 PTGISQ16647 500 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 GDF6Q6KF10 455 aaPredicted RBP16.45■□□□□ 0.22
TUBE1-208ENST00000604743 TEX2Q8IWB9 1127 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 NECAB1Q8N987 351 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
TUBE1-208ENST00000604743 AIFM3Q96NN9 605 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 GPR20Q99678 358 aa16.45■□□□□ 0.22
TUBE1-208ENST00000604743 CDKL5O76039 1030 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 ARP10275 920 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 HOXD8P13378 290 aaPredicted RBP16.44■□□□□ 0.22
TUBE1-208ENST00000604743 PPIGQ13427 754 aaKnown RBP eCLIP16.44■□□□□ 0.22
TUBE1-208ENST00000604743 LRIT3Q3SXY7 679 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 CEP55Q53EZ4 464 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 BICD2Q8TD16 824 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 IL17RAQ96F46 866 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 SCLYQ96I15 445 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 UIMC1Q96RL1 719 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 C16orf70Q9BSU1 422 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 SH3GLB2Q9NR46 395 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 KCNH7Q9NS40 1196 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 GTF2IRD1Q9UHL9 959 aa16.44■□□□□ 0.22
TUBE1-208ENST00000604743 H3BRB1 525 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 HAS3O00219 553 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 MAFGO15525 162 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 LARGE1O95461 756 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 ZNF200P98182 395 aaPredicted RBP16.43■□□□□ 0.22
TUBE1-208ENST00000604743 ME3Q16798 604 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 TRIM50Q86XT4 487 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 RNPC3Q96LT9 517 aaKnown RBP16.43■□□□□ 0.22
TUBE1-208ENST00000604743 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.43■□□□□ 0.224e-13■■□□□ 13.6
TUBE1-208ENST00000604743 WNT8AQ9H1J5 351 aa16.43■□□□□ 0.22
TUBE1-208ENST00000604743 TUT1Q9H6E5 874 aaKnown RBP16.43■□□□□ 0.22
TUBE1-208ENST00000604743 TCF7P36402 384 aaPredicted RBP16.42■□□□□ 0.22
TUBE1-208ENST00000604743 MCTP2Q6DN12 878 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 PLA2G4DQ86XP0 818 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 RETREG2Q8NC44 543 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 SEPT1Q8WYJ6 367 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
TUBE1-208ENST00000604743 LAMA3Q16787 3333 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 GSTTP1A0A1W2PQM5 241 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 FAM86B1E9PN63 330 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 DDX39AO00148 427 aaKnown RBP16.41■□□□□ 0.22
TUBE1-208ENST00000604743 MEIS1O00470 390 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 CTDNEP1O95476 244 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 FAM86B2P0C5J1 330 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 BFSP2Q13515 415 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 TMEM240Q5SV17 173 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 ZNF365Q70YC5 407 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 C16orf59Q7L2K0 433 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 DEFB128Q7Z7B8 93 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 C22orf23Q9BZE7 217 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 AGO4Q9HCK5 861 aaKnown RBP16.41■□□□□ 0.22
TUBE1-208ENST00000604743 JPH1Q9HDC5 661 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-208ENST00000604743 IL23AQ9NPF7 189 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-208ENST00000604743 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 ZNF215Q9UL58 517 aaPredicted RBP16.41■□□□□ 0.22
TUBE1-208ENST00000604743 PCDHA4Q9UN74 947 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 SZT2Q5T011 3432 aa16.41■□□□□ 0.22
TUBE1-208ENST00000604743 TANC1Q9C0D5 1861 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 C17orf102A2RUQ5 167 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 SLC34A2O95436 690 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 CYP3A4P08684 503 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 SMIM10L2AP0DMW4 78 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 SMIM10L2BP0DMW5 78 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 MARK3P27448 753 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 ITGB3BPQ13352 177 aaPredicted RBP16.4■□□□□ 0.22
TUBE1-208ENST00000604743 HIC1Q14526 733 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 BLIDQ8IZY5 108 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 CCDC155Q8N6L0 562 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 GLG1Q92896 1179 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 GTF3C6Q969F1 213 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 CTAGE1Q96RT6 745 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms