RNA–Protein interactions for RNA: ENST00000604247.1

SRGAP2-209, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

Gene SRGAP2, Length 2,499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-209ENST00000604247 MATR3P43243 847 aaKnown RBP eCLIP14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 GPATCH4Q5T3I0 446 aaKnown RBP14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 POTEBQ6S5H4 581 aa14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 OSBPL9Q96SU4 736 aa14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 LRRC1Q9BTT6 524 aa14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 ATF5Q9Y2D1 282 aaPredicted RBP14.36□□□□□ -0.11
SRGAP2-209ENST00000604247 BUB1O43683 1085 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 STAT3P40763 770 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 SLC1A4P43007 532 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 CACNB3P54284 484 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 MAP9Q49MG5 647 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 TMC4Q7Z404 712 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 MTMR8Q96EF0 704 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 VIPAS39Q9H9C1 493 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 BMP2KQ9NSY1 1161 aaPredicted RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 DMGDHQ9UI17 866 aaKnown RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 PCDHA2Q9Y5H9 948 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 PCDHAC2Q9Y5I4 1007 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 ZC3H4Q9UPT8 1303 aaKnown RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 ADAMTSL1Q8N6G6 1762 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 TLR2O60603 784 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 PLA2G4BP0C869 781 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 QRICH1Q2TAL8 776 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 TDRD12Q587J7 1177 aaKnown RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 HERC4Q5GLZ8 1057 aaPredicted RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 APOBEC3HQ6NTF7 200 aaKnown RBP14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 SPATA4Q8NEY3 305 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 SELENOOQ9BVL4 669 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 ACBD3Q9H3P7 528 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 FAM204AQ9H8W3 233 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 MED4Q9NPJ6 270 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 PCDHA1Q9Y5I3 950 aa14.35□□□□□ -0.11
SRGAP2-209ENST00000604247 GCFC2P16383 781 aaKnown RBP14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 PRLRP16471 622 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 ACTN2P35609 894 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 POLR2FP61218 127 aaKnown RBP14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 SLC7A5Q01650 507 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 HYIQ5T013 277 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 FAM83BQ5T0W9 1011 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 ZHX3Q9H4I2 956 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 DNAJC18Q9H819 358 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 PJA2O43164 708 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 RNF40O75150 1001 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 AARSP49588 968 aaKnown RBP eCLIP14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 SNAP25P60880 206 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 TCP10Q12799 353 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 SEPT2Q15019 361 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 MUM1L1Q5H9M0 696 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 GPBP1Q86WP2 473 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 MMGT1Q8N4V1 131 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 SCFD1Q8WVM8 642 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 TLR10Q9BXR5 811 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 NT5C3AQ9H0P0 336 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 SUGT1Q9Y2Z0 365 aa14.34□□□□□ -0.11
SRGAP2-209ENST00000604247 MED24O75448 989 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 HLA-DOAP06340 250 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 EEF2P13639 858 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 CYP11B2P19099 503 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 GGCXP38435 758 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 NAP1L1P55209 391 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 ARID5AQ03989 594 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 MAPK8IP2Q13387 824 aaPredicted RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 ARSHQ5FYA8 562 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 IQCEQ6IPM2 695 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 CCDC65Q8IXS2 484 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 GOLGA5Q8TBA6 731 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 ALS2CR12Q96Q35 445 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 P2RX7Q99572 595 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 LSM14BQ9BX40 385 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 EDEM3Q9BZQ6 932 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 KCTD10Q9H3F6 313 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 EMILIN3Q9NT22 766 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 SSU72P8A0A1W2PR75 194 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 PRPF6O94906 941 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 MMP10P09238 476 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 ENOX2Q16206 610 aaKnown RBP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 SLC9C1Q4G0N8 1177 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 KLHDC7AQ5VTJ3 777 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 SFMBT2Q5VUG0 894 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 FOXR2Q6PJQ5 311 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 TRIM59Q8IWR1 403 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 ANO3Q9BYT9 981 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 KCNMB3Q9NPA1 279 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 CEP72Q9P209 647 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 HYOU1Q9Y4L1 999 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 KDM3AQ9Y4C1 1321 aa14.33□□□□□ -0.12
SRGAP2-209ENST00000604247 POTEFA5A3E0 1075 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 AGPSO00116 658 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 POTEIP0CG38 1075 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 TCP1P17987 556 aaKnown RBP14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 PSMC6P62333 389 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 POTEGQ6S5H5 508 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 POTEEQ6S8J3 1075 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 TEKT1Q969V4 418 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 MS4A14Q96JA4 679 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 MYO3BQ8WXR4 1341 aa14.32□□□□□ -0.12
SRGAP2-209ENST00000604247 COL11A2P13942 1736 aaPredicted RBP14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms