RNA–Protein interactions for RNA: ENST00000603552.1

FOCAD-205, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-205ENST00000603552 CRY1Q16526 586 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 EFCAB2Q5VUJ9 269 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 CREB3L3Q68CJ9 461 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 INTS5Q6P9B9 1019 aaKnown RBP6.92□□□□□ -1.3
FOCAD-205ENST00000603552 RASSF3Q86WH2 238 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 GIMAP7Q8NHV1 300 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 SHKBP1Q8TBC3 707 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 TTC17Q96AE7 1141 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 E2F7Q96AV8 911 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 MMP19Q99542 508 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 MAN1C1Q9NR34 630 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 SAP30BPQ9UHR5 308 aaKnown RBP6.92□□□□□ -1.3
FOCAD-205ENST00000603552 TAGLN3Q9UI15 199 aa6.92□□□□□ -1.3
FOCAD-205ENST00000603552 TRBV23OR9-2A0A075B6M9 112 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 ANO9A1A5B4 782 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 KLHL33A6NCF5 533 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 TRIM75PA6NK02 468 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 GOLGA8AA7E2F4 631 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 GOLGA8BA8MQT2 603 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 HMGB1P1B2RPK0 211 aaPredicted RBP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 MYO1BO43795 1136 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA12O60330 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 KRT37O76014 449 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 GSTM1P09488 218 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 YBX3P16989 372 aaKnown RBP eCLIP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 GRK3P35626 688 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 SAFBQ15424 915 aaKnown RBP eCLIP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 CLUL1Q15846 466 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 SEZ6L2Q6UXD5 910 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 OTOP1Q7RTM1 612 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 SPICE1Q8N0Z3 855 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 TCTN2Q96GX1 697 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 CHAMP1Q96JM3 812 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 BOCQ9BWV1 1114 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 ATG3Q9NT62 314 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 CBLCQ9ULV8 474 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 NOC2LQ9Y3T9 749 aaKnown RBP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 DAAM1Q9Y4D1 1078 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA9Q9Y5G4 932 aaKnown RBP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA8Q9Y5G5 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA7Q9Y5G6 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA6Q9Y5G7 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA3Q9Y5H0 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 PCDHGA2Q9Y5H1 932 aa6.91□□□□□ -1.3
FOCAD-205ENST00000603552 OAS3Q9Y6K5 1087 aaKnown RBP6.91□□□□□ -1.3
FOCAD-205ENST00000603552 APAF1O14727 1248 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 LEFTY1O75610 366 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 ASGR2P07307 311 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 HSPA6P17066 643 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 TPP2P29144 1249 aaPredicted RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 LSP1P33241 339 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 LACTBP83111 547 aaPredicted RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 RBM10P98175 930 aaKnown RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 ACAP2Q15057 778 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 TERF2Q15554 542 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 ZNF174Q15697 407 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 CPSF6Q16630 551 aaKnown RBP eCLIP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 INF2Q27J81 1249 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 GPR158Q5T848 1215 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 DTX1Q86Y01 620 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 PIWIL2Q8TC59 973 aaKnown RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 KCNJ15Q99712 375 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 C1GALT1Q9NS00 363 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 TOPORSQ9NS56 1045 aaPredicted RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 PPARGC1AQ9UBK2 798 aaKnown RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 DDX20Q9UHI6 824 aaKnown RBP6.9□□□□□ -1.3
FOCAD-205ENST00000603552 FAM50BQ9Y247 325 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 INVSQ9Y283 1065 aa6.9□□□□□ -1.3
FOCAD-205ENST00000603552 FAM95CA0A1B0GW59 222 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 SLC12A8A0AV02 714 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 PDE6AP16499 860 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 HTRA3P83110 453 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 TNK2Q07912 1038 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 LSAMPQ13449 338 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 GRAMD1BQ3KR37 738 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 MORC1Q86VD1 984 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 CMIPQ8IY22 773 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 MFSD14AQ96MC6 490 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 STRBPQ96SI9 672 aaKnown RBP6.89□□□□□ -1.31
FOCAD-205ENST00000603552 ELAC2Q9BQ52 826 aaKnown RBP6.89□□□□□ -1.31
FOCAD-205ENST00000603552 GPR62Q9BZJ7 368 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 NMRK2Q9NPI5 230 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 C1orf112Q9NSG2 853 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 GTF2IRD1Q9UHL9 959 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 SPO11Q9Y5K1 396 aa6.89□□□□□ -1.31
FOCAD-205ENST00000603552 TIMM13Q9Y5L4 95 aaPredicted RBP6.89□□□□□ -1.31
FOCAD-205ENST00000603552 SSU72P8A0A1W2PR75 194 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 H2AFYO75367 372 aaKnown RBP6.88□□□□□ -1.31
FOCAD-205ENST00000603552 ZNF205O95201 554 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 F13BP05160 661 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 SYPP08247 313 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 FAM87AP0C7U9 286 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 SLC9A1P19634 815 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 GPR3P46089 330 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 HTR3AP46098 478 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 PHC1P78364 1004 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 IRX6P78412 446 aaPredicted RBP6.88□□□□□ -1.31
FOCAD-205ENST00000603552 NFKBIBQ15653 356 aa6.88□□□□□ -1.31
FOCAD-205ENST00000603552 RRP12Q5JTH9 1297 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms