RNA–Protein interactions for RNA: ENST00000603552.1

FOCAD-205, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-205ENST00000603552 AEBP2Q6ZN18 517 aaPredicted RBP24.83■■□□□ 1.57
FOCAD-205ENST00000603552 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
FOCAD-205ENST00000603552 SENP3Q9H4L4 574 aaPredicted RBP21.11■□□□□ 0.97
FOCAD-205ENST00000603552 PHF23Q9BUL5 403 aaPredicted RBP20.89■□□□□ 0.93
FOCAD-205ENST00000603552 FOXD1Q16676 465 aa19.8■□□□□ 0.76
FOCAD-205ENST00000603552 POTEDQ86YR6 584 aa18.63■□□□□ 0.57
FOCAD-205ENST00000603552 MSH5O43196 834 aa18.52■□□□□ 0.56
FOCAD-205ENST00000603552 PLPPR3Q6T4P5 718 aa18.49■□□□□ 0.55
FOCAD-205ENST00000603552 PIAS4Q8N2W9 510 aaPredicted RBP18.4■□□□□ 0.54
FOCAD-205ENST00000603552 PPP6R1Q9UPN7 881 aa18.37■□□□□ 0.53
FOCAD-205ENST00000603552 ADRA2BP18089 450 aa18.28■□□□□ 0.52
FOCAD-205ENST00000603552 MAPK8IP2Q13387 824 aaPredicted RBP16.91■□□□□ 0.3
FOCAD-205ENST00000603552 DMRT2Q9Y5R5 561 aa16.72■□□□□ 0.27
FOCAD-205ENST00000603552 SCAF1Q9H7N4 1312 aaKnown RBP16.6■□□□□ 0.25
FOCAD-205ENST00000603552 PPP4R3CPQ6ZMV5 832 aa16.22■□□□□ 0.19
FOCAD-205ENST00000603552 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
FOCAD-205ENST00000603552 DCAF8L1A6NGE4 600 aa16.12■□□□□ 0.17
FOCAD-205ENST00000603552 HOXD11P31277 338 aaPredicted RBP15.99■□□□□ 0.15
FOCAD-205ENST00000603552 CNKSR2Q8WXI2 1034 aa15.88■□□□□ 0.13
FOCAD-205ENST00000603552 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
FOCAD-205ENST00000603552 RNF216Q9NWF9 866 aaPredicted RBP15.79■□□□□ 0.12
FOCAD-205ENST00000603552 NCBP3Q53F19 620 aaKnown RBP15.68■□□□□ 0.1
FOCAD-205ENST00000603552 C1QBPQ07021 282 aaKnown RBP15.55■□□□□ 0.08
FOCAD-205ENST00000603552 NPM3O75607 178 aaKnown RBP15.47■□□□□ 0.07
FOCAD-205ENST00000603552 KCNA4P22459 653 aa15.42■□□□□ 0.06
FOCAD-205ENST00000603552 DNAJC5BQ9UF47 199 aa15.41■□□□□ 0.06
FOCAD-205ENST00000603552 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.28■□□□□ 0.04
FOCAD-205ENST00000603552 U3KPZ7 1027 aaPredicted RBP14.92□□□□□ -0.02
FOCAD-205ENST00000603552 SPINK5Q9NQ38 1064 aaPredicted RBP14.84□□□□□ -0.03
FOCAD-205ENST00000603552 CAPN15O75808 1086 aa14.79□□□□□ -0.04
FOCAD-205ENST00000603552 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
FOCAD-205ENST00000603552 DSG3P32926 999 aa14.76□□□□□ -0.05
FOCAD-205ENST00000603552 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
FOCAD-205ENST00000603552 SLC4A1APQ9BWU0 796 aaKnown RBP14.6□□□□□ -0.07
FOCAD-205ENST00000603552 POTEHQ6S545 545 aa14.53□□□□□ -0.08
FOCAD-205ENST00000603552 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
FOCAD-205ENST00000603552 ABCB7O75027 752 aa14.47□□□□□ -0.09
FOCAD-205ENST00000603552 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.36□□□□□ -0.11
FOCAD-205ENST00000603552 HNRNPUL2Q1KMD3 747 aaKnown RBP14.36□□□□□ -0.11
FOCAD-205ENST00000603552 ZNF219Q9P2Y4 722 aaPredicted RBP14.36□□□□□ -0.11
FOCAD-205ENST00000603552 APLP2Q06481 763 aa14.35□□□□□ -0.11
FOCAD-205ENST00000603552 MYCNP04198 464 aaPredicted RBP14.32□□□□□ -0.12
FOCAD-205ENST00000603552 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
FOCAD-205ENST00000603552 SAMD1Q6SPF0 538 aaPredicted RBP14.28□□□□□ -0.12
FOCAD-205ENST00000603552 CSRNP3Q8WYN3 585 aa14.21□□□□□ -0.13
FOCAD-205ENST00000603552 ZBTB22O15209 634 aa14.2□□□□□ -0.14
FOCAD-205ENST00000603552 POLA2Q14181 598 aa14.06□□□□□ -0.16
FOCAD-205ENST00000603552 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
FOCAD-205ENST00000603552 ATF5Q9Y2D1 282 aaPredicted RBP13.94□□□□□ -0.18
FOCAD-205ENST00000603552 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
FOCAD-205ENST00000603552 CHRDL2Q6WN34 429 aa13.86□□□□□ -0.19
FOCAD-205ENST00000603552 AKT1S1Q96B36 256 aa13.67□□□□□ -0.22
FOCAD-205ENST00000603552 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
FOCAD-205ENST00000603552 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
FOCAD-205ENST00000603552 REM2Q8IYK8 340 aaPredicted RBP13.58□□□□□ -0.24
FOCAD-205ENST00000603552 PIP4P2Q8N4L2 257 aa13.51□□□□□ -0.25
FOCAD-205ENST00000603552 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
FOCAD-205ENST00000603552 PITPNM1O00562 1244 aa13.44□□□□□ -0.26
FOCAD-205ENST00000603552 FXR2P51116 673 aaKnown RBP eCLIP13.36□□□□□ -0.27
FOCAD-205ENST00000603552 FBLN2P98095 1184 aa13.36□□□□□ -0.27
FOCAD-205ENST00000603552 HAX1O00165 279 aa13.35□□□□□ -0.27
FOCAD-205ENST00000603552 MKRN4PQ13434 485 aaPredicted RBP13.33□□□□□ -0.28
FOCAD-205ENST00000603552 EVX2Q03828 476 aa13.24□□□□□ -0.29
FOCAD-205ENST00000603552 SPDYE2BA6NHP3 402 aa13.22□□□□□ -0.29
FOCAD-205ENST00000603552 SPDYE6P0CI01 402 aa13.22□□□□□ -0.29
FOCAD-205ENST00000603552 SPDYE2Q495Y8 402 aa13.22□□□□□ -0.29
FOCAD-205ENST00000603552 SLC24A1O60721 1099 aa13.2□□□□□ -0.3
FOCAD-205ENST00000603552 CLEC11AQ9Y240 323 aa13.14□□□□□ -0.31
FOCAD-205ENST00000603552 RTN4Q9NQC3 1192 aaKnown RBP13.12□□□□□ -0.31
FOCAD-205ENST00000603552 AMER1Q5JTC6 1135 aaPredicted RBP13.11□□□□□ -0.31
FOCAD-205ENST00000603552 PRKAR2AP13861 404 aaKnown RBP13.1□□□□□ -0.31
FOCAD-205ENST00000603552 ZNF692Q9BU19 519 aaPredicted RBP13.09□□□□□ -0.31
FOCAD-205ENST00000603552 SSUH2Q9Y2M2 353 aa13.09□□□□□ -0.31
FOCAD-205ENST00000603552 SPDYE1Q8NFV5 336 aaPredicted RBP13.06□□□□□ -0.32
FOCAD-205ENST00000603552 C19orf67A6NJJ6 358 aa12.95□□□□□ -0.34
FOCAD-205ENST00000603552 CHADLQ6NUI6 762 aa12.95□□□□□ -0.34
FOCAD-205ENST00000603552 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
FOCAD-205ENST00000603552 GABBR2O75899 941 aa12.86□□□□□ -0.35
FOCAD-205ENST00000603552 PRR29P0C7W0 189 aa12.85□□□□□ -0.35
FOCAD-205ENST00000603552 SPDYE4A6NLX3 237 aa12.82□□□□□ -0.36
FOCAD-205ENST00000603552 FKBP8Q14318 412 aa12.81□□□□□ -0.36
FOCAD-205ENST00000603552 LHX8Q68G74 356 aa12.67□□□□□ -0.38
FOCAD-205ENST00000603552 FARP1Q9Y4F1 1045 aaPredicted RBP12.67□□□□□ -0.38
FOCAD-205ENST00000603552 CD44P16070 742 aaKnown RBP12.65□□□□□ -0.38
FOCAD-205ENST00000603552 PROM2Q8N271 834 aa12.65□□□□□ -0.38
FOCAD-205ENST00000603552 POTEIP0CG38 1075 aa12.61□□□□□ -0.39
FOCAD-205ENST00000603552 STAG3Q9UJ98 1225 aa12.6□□□□□ -0.39
FOCAD-205ENST00000603552 CREBZFQ9NS37 354 aa12.49□□□□□ -0.41
FOCAD-205ENST00000603552 ZRANB1Q9UGI0 708 aa12.45□□□□□ -0.42
FOCAD-205ENST00000603552 DCBLD2Q96PD2 775 aa12.42□□□□□ -0.42
FOCAD-205ENST00000603552 CLCN6P51797 869 aa12.41□□□□□ -0.42
FOCAD-205ENST00000603552 ZNF579Q8NAF0 562 aaKnown RBP12.4□□□□□ -0.42
FOCAD-205ENST00000603552 GALR2O43603 387 aaPredicted RBP12.34□□□□□ -0.43
FOCAD-205ENST00000603552 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
FOCAD-205ENST00000603552 PHF12Q96QT6 1004 aa12.27□□□□□ -0.45
FOCAD-205ENST00000603552 POTEB2H3BUK9 544 aa12.21□□□□□ -0.45
FOCAD-205ENST00000603552 PAK3O75914 559 aaPredicted RBP12.21□□□□□ -0.45
FOCAD-205ENST00000603552 NPM1P06748 294 aaKnown RBP eCLIP12.2□□□□□ -0.46
FOCAD-205ENST00000603552 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
FOCAD-205ENST00000603552 OTUD5Q96G74 571 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms