RNA–Protein interactions for RNA: ENST00000599964.1

COPE-209, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 4

Gene COPE, Length 542 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-209ENST00000599964 ATP9AO75110 1047 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 OR52Z1P0C646 297 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 SP2Q02086 613 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 COL13A1Q5TAT6 717 aaPredicted RBP21.49■■□□□ 1.03
COPE-209ENST00000599964 ANO1Q5XXA6 986 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 FAM173BQ6P4H8 233 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 CYFIP1Q7L576 1253 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 ETNPPLQ8TBG4 499 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 JPH1Q9HDC5 661 aaPredicted RBP21.49■■□□□ 1.03
COPE-209ENST00000599964 CFAP45Q9UL16 551 aa21.49■■□□□ 1.03
COPE-209ENST00000599964 ADCY6O43306 1168 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 GJB1P08034 283 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 CPT1AP50416 773 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 GJA9P57773 515 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 KRT76Q01546 638 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 ARHGAP1Q07960 439 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 PTGDRQ13258 359 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 ITGB3BPQ13352 177 aaPredicted RBP21.48■■□□□ 1.03
COPE-209ENST00000599964 SF3A1Q15459 793 aaKnown RBP21.48■■□□□ 1.03
COPE-209ENST00000599964 TMEM266Q2M3C6 531 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 RNF180Q86T96 592 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 ARRDC4Q8NCT1 418 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 COPS5Q92905 334 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 SPATA33Q96N06 139 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 SLC9A2Q9UBY0 812 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 PCDHA12Q9UN75 941 aa21.48■■□□□ 1.03
COPE-209ENST00000599964 MYH15Q9Y2K3 1946 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 ZEB2O60315 1214 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 FARP2O94887 1054 aaPredicted RBP21.47■■□□□ 1.03
COPE-209ENST00000599964 C6orf222P0C671 652 aaPredicted RBP21.47■■□□□ 1.03
COPE-209ENST00000599964 TMEM63BQ5T3F8 832 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 GJC2Q5T442 439 aaPredicted RBP21.47■■□□□ 1.03
COPE-209ENST00000599964 LHX8Q68G74 356 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 LENG1Q96BZ8 264 aaPredicted RBP21.47■■□□□ 1.03
COPE-209ENST00000599964 MTMR9Q96QG7 549 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 UPF3AQ9H1J1 476 aaKnown RBP21.47■■□□□ 1.03
COPE-209ENST00000599964 POLR3EQ9NVU0 708 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 SYNRGQ9UMZ2 1314 aa21.47■■□□□ 1.03
COPE-209ENST00000599964 HTTP42858 3142 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 PSMD10O75832 226 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 PRPHP41219 470 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 TXKP42681 527 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 FOXD4L6Q3SYB3 417 aaPredicted RBP21.46■■□□□ 1.03
COPE-209ENST00000599964 ARL6IP4Q66PJ3 421 aaKnown RBP21.46■■□□□ 1.03
COPE-209ENST00000599964 ZNF746Q6NUN9 644 aaPredicted RBP21.46■■□□□ 1.03
COPE-209ENST00000599964 FOXD4L3Q6VB84 417 aaPredicted RBP21.46■■□□□ 1.03
COPE-209ENST00000599964 PPTC7Q8NI37 304 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 HAS1Q92839 578 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 UIMC1Q96RL1 719 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 USP28Q96RU2 1077 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 RAB34Q9BZG1 259 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 TMEM60Q9H2L4 133 aa21.46■■□□□ 1.03
COPE-209ENST00000599964 TTC12Q9H892 705 aaPredicted RBP21.46■■□□□ 1.03
COPE-209ENST00000599964 DDX39AO00148 427 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 DHX15O43143 795 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 SORBS3O60504 671 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 SGPL1O95470 568 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 PGK1P00558 417 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 TFRCP02786 760 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 MYCNP04198 464 aaPredicted RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 NKX3-2P78367 333 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 KRT85P78386 507 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 ATP2C1P98194 919 aaPredicted RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 SP4Q02446 784 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 CEBPZQ03701 1054 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 STK38Q15208 465 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 FSCN1Q16658 493 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 U2AF1L4Q8WU68 220 aaKnown RBP21.45■■□□□ 1.02
COPE-209ENST00000599964 CLIC4Q9Y696 253 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 ELP1O95163 1332 aa21.45■■□□□ 1.02
COPE-209ENST00000599964 A6NJR5 290 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 WDR64B1ANS9 1081 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 KPNA6O60684 536 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 ADAMTS4O75173 837 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 YEATS4O95619 227 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 NCLP19338 710 aaKnown RBP21.44■■□□□ 1.02
COPE-209ENST00000599964 SFNP31947 248 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 GJA8P48165 433 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 NASPP49321 788 aaPredicted RBP21.44■■□□□ 1.02
COPE-209ENST00000599964 JAK3P52333 1124 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 HSDL1Q3SXM5 330 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 GNASQ5JWF2 1037 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 DTHD1Q6ZMT9 781 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 C4orf32Q8N8J7 132 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 PCSK9Q8NBP7 692 aaKnown RBP21.44■■□□□ 1.02
COPE-209ENST00000599964 AFG1LQ8WV93 481 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 SEPT1Q8WYJ6 367 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 TFIP11Q9UBB9 837 aaKnown RBP21.44■■□□□ 1.02
COPE-209ENST00000599964 SAMM50Q9Y512 469 aa21.44■■□□□ 1.02
COPE-209ENST00000599964 FRMPD3Q5JV73 1810 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 KBTBD13C9JR72 458 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 PPFIA4O75335 1185 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 CST5P28325 142 aaPredicted RBP21.43■■□□□ 1.02
COPE-209ENST00000599964 ACTR2P61160 394 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 DNM1Q05193 864 aaKnown RBP21.43■■□□□ 1.02
COPE-209ENST00000599964 PPP2R5CQ13362 524 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 DGKDQ16760 1214 aa21.43■■□□□ 1.02
COPE-209ENST00000599964 MIS18BP1Q6P0N0 1132 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms