RNA–Protein interactions for RNA: ENST00000599227.5

ZNF544-213, Transcript of zinc finger protein 544, humanhuman

TSL 1 (best) BASIC

Gene ZNF544, Length 3,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-213ENST00000599227 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 COL18A1P39060 1754 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 IVLP07476 585 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 TRADDQ15628 312 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 TMED8Q6PL24 325 aaPredicted RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 EEPD1Q7L9B9 569 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 SPATA4Q8NEY3 305 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 DNAJC7Q99615 494 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 TSPYL1Q9H0U9 437 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 SALL4Q9UJQ4 1053 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 DAGLAQ9Y4D2 1042 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 RASSF10A6NK89 507 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 EIF3CLB5ME19 914 aaKnown RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 SYF2O95926 243 aaKnown RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 ACTN1P12814 892 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 DGKZQ13574 1117 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 CYP2W1Q8TAV3 490 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 GJD4Q96KN9 370 aaPredicted RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 OSBPL9Q96SU4 736 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 EIF3CQ99613 913 aaKnown RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 MTA3Q9BTC8 594 aa12.36□□□□□ -0.43
ZNF544-213ENST00000599227 RBM12Q9NTZ6 932 aaKnown RBP12.36□□□□□ -0.43
ZNF544-213ENST00000599227 SPATA31A5Q5VU36 1347 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 SPATA31A7Q8IWB4 1347 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 PSMD14O00487 310 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 LRRN2O75325 713 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 TBCAO75347 108 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 SF3B3Q15393 1217 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 KIAA0753Q2KHM9 967 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 RNF187Q5TA31 235 aaPredicted RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 IQCEQ6IPM2 695 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 KRT27Q7Z3Y8 459 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 HNRNPLLQ8WVV9 542 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 ARL8AQ96BM9 186 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 FGFBP2Q9BYJ0 223 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 DDX4Q9NQI0 724 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 H0YIN7 160 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 HSF2BPO75031 334 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 ALAS1P13196 640 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 GRM1Q13255 1194 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 ODF2Q5BJF6 829 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 CCNI2Q6ZMN8 369 aaPredicted RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 SLF2Q8IX21 1173 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 TRIM58Q8NG06 486 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 CUL5Q93034 780 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 NUP58Q9BVL2 599 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 PACSIN1Q9BY11 444 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 UBXN6Q9BZV1 441 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 PDGFDQ9GZP0 370 aaPredicted RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 BCAS3Q9H6U6 928 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 FBXO28Q9NVF7 368 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 ZBTB39O15060 712 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 MRPL12P52815 198 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 SF3B2Q13435 895 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 TUBB2AQ13885 445 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 CLEC4GQ6UXB4 293 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 MYCT1Q8N699 235 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 CCDC127Q96BQ5 260 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
ZNF544-213ENST00000599227 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 FAM84AQ96KN4 292 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 TUBB2BQ9BVA1 445 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 AP1M1Q9BXS5 423 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 GINS2Q9Y248 185 aa12.35□□□□□ -0.43
ZNF544-213ENST00000599227 ADAMTS7Q9UKP4 1686 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 PALMO75781 387 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 TTLL12Q14166 644 aaPredicted RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 MIIPQ5JXC2 388 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 DEFB132Q7Z7B7 95 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 CTNNBL1Q8WYA6 563 aaPredicted RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 CCSER1Q9C0I3 900 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 USP20Q9Y2K6 914 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 FLT1P17948 1338 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 CARSP49589 748 aaKnown RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 KLHL30Q0D2K2 578 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 GRB10Q13322 594 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 ADGRF4Q8IZF3 695 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 TAF4BQ92750 862 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 PPP1R16BQ96T49 567 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 SNX12Q9UMY4 172 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 GLI3P10071 1580 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 A0A1W2PQC6 194 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 TLDC2A0PJX2 215 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 KCNK3O14649 394 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 CEP104O60308 925 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 HEXIM1O94992 359 aaKnown RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 DDX42Q86XP3 938 aaKnown RBP eCLIP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 TSEN2Q8NCE0 465 aaKnown RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 NOX5Q96PH1 765 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 MMTAG2Q9BU76 263 aaKnown RBP12.34□□□□□ -0.43
ZNF544-213ENST00000599227 MED4Q9NPJ6 270 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 SLIT2O94813 1529 aa12.34□□□□□ -0.43
ZNF544-213ENST00000599227 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.43
ZNF544-213ENST00000599227 CFAP58Q5T655 872 aa12.33□□□□□ -0.44
ZNF544-213ENST00000599227 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
ZNF544-213ENST00000599227 BHMT2Q9H2M3 363 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms