RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 IQCF3P0C7M6 154 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 SCG2P13521 617 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 PSMA5P28066 241 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 RBL2Q08999 1139 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 PSRC1Q6PGN9 363 aaPredicted RBP13.94□□□□□ -0.18
LIG1-217ENST00000599165 TRIM50Q86XT4 487 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 CRYGNQ8WXF5 182 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 PHKBQ93100 1093 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 GPRASP2Q96D09 838 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 SENP7Q9BQF6 1050 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 LARP6Q9BRS8 491 aaKnown RBP13.94□□□□□ -0.18
LIG1-217ENST00000599165 TM6SF1Q9BZW5 370 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 MLXIPQ9HAP2 919 aa13.94□□□□□ -0.18
LIG1-217ENST00000599165 NAP1L2Q9ULW6 460 aaPredicted RBP13.94□□□□□ -0.18
LIG1-217ENST00000599165 SIP14410 1827 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 SMCO2A6NFE2 343 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 hCG_1984214I3L0E3 225 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 PRPF3O43395 683 aaKnown RBP13.93□□□□□ -0.18
LIG1-217ENST00000599165 EDIL3O43854 480 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 PBX2P40425 430 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 ADCY7P51828 1080 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 FGD1P98174 961 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 NEDD9Q14511 834 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 TCTN1Q2MV58 587 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 ZNF713Q8N859 430 aaPredicted RBP13.93□□□□□ -0.18
LIG1-217ENST00000599165 IL17RAQ96F46 866 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 FAM161BQ96MY7 647 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 ANO3Q9BYT9 981 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 JADE2Q9NQC1 790 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 KAT6AQ92794 2004 aa13.93□□□□□ -0.18
LIG1-217ENST00000599165 WDR81Q562E7 1941 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 CHD9Q3L8U1 2897 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.92□□□□□ -0.18
LIG1-217ENST00000599165 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.92□□□□□ -0.18
LIG1-217ENST00000599165 GSTTP1A0A1W2PQM5 241 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 ESYT2A0FGR8 921 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 SPDYE3A6NKU9 549 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 H3BRB1 525 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 IFNAR1P17181 557 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 SREBF1P36956 1147 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 CCT2P78371 535 aaKnown RBP13.92□□□□□ -0.18
LIG1-217ENST00000599165 MBTPS1Q14703 1052 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 OTOP2Q7RTS6 562 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 NLRX1Q86UT6 975 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 TEX2Q8IWB9 1127 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 C7orf31Q8N865 590 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 KATNAL1Q9BW62 490 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 ZMYND12Q9H0C1 365 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 SEMA6BQ9H3T3 888 aa13.92□□□□□ -0.18
LIG1-217ENST00000599165 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
LIG1-217ENST00000599165 CCDC196A0A1B0GTZ2 297 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 SEC24BO95487 1268 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 FGBP02675 491 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 CENPBP07199 599 aaPredicted RBP13.91□□□□□ -0.18
LIG1-217ENST00000599165 ARP10275 920 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 DNAJB2P25686 324 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 ADAM17P78536 824 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 SP4Q02446 784 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 ITGB3BPQ13352 177 aaPredicted RBP13.91□□□□□ -0.18
LIG1-217ENST00000599165 MTMR1Q13613 665 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 DEFB128Q7Z7B8 93 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 PCYT2Q99447 389 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 MXRA8Q9BRK3 442 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
LIG1-217ENST00000599165 PBX4Q9BYU1 374 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 OSBPL7Q9BZF2 842 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 KCNH7Q9NS40 1196 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 PKD2L1Q9P0L9 805 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 CYP46A1Q9Y6A2 500 aa13.91□□□□□ -0.18
LIG1-217ENST00000599165 EYSQ5T1H1 3165 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 IGLV3-22A0A075B6J6 115 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 FAM86B1E9PN63 330 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 MEIS1O00470 390 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 NBNO60934 754 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 FOSP01100 380 aaPredicted RBP13.9□□□□□ -0.18
LIG1-217ENST00000599165 FAM86B2P0C5J1 330 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 SMIM10L2AP0DMW4 78 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 SMIM10L2BP0DMW5 78 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 CKBP12277 381 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 PTK7Q13308 1070 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 AP3B2Q13367 1082 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 BFSP2Q13515 415 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 JAKMIP3Q5VZ66 844 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 SERINC5Q86VE9 423 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 CAGE1Q8TC20 777 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 RASGRP4Q8TDF6 673 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 AFAP1L1Q8TED9 768 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 RNPEPQ9H4A4 650 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 STXBP5LQ9Y2K9 1186 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 YBX2Q9Y2T7 364 aaKnown RBP13.9□□□□□ -0.18
LIG1-217ENST00000599165 MICAL3Q7RTP6 2002 aa13.9□□□□□ -0.18
LIG1-217ENST00000599165 CHD7Q9P2D1 2997 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 NOP56O00567 594 aaKnown RBP13.89□□□□□ -0.19
LIG1-217ENST00000599165 TREHO43280 583 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 DTNBO60941 627 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 CXCL10P02778 98 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 PFKMP08237 780 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 SELPP16109 830 aa13.89□□□□□ -0.19
LIG1-217ENST00000599165 RFC2P35250 354 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms