RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-215ENST00000597649 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 ATP6V0A1Q93050 837 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 RNPEPQ9H4A4 650 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 MAD2L2Q9UI95 211 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 TELO2Q9Y4R8 837 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 PCDHA1Q9Y5I3 950 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 GTF3C3Q9Y5Q9 886 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 SIP14410 1827 aa19.11■□□□□ 0.65
SHKBP1-215ENST00000597649 C17orf102A2RUQ5 167 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 H3BNC9 293 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 H3BRB1 525 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 UPP2O95045 317 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 SMIM10L2AP0DMW4 78 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 SMIM10L2BP0DMW5 78 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 TGFB3P10600 412 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 SSTR3P32745 418 aaPredicted RBP19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 SEC23AQ15436 765 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 TCEAL5Q5H9L2 206 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 KCNV1Q6PIU1 500 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 TUT1Q9H6E5 874 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 MLXIPQ9HAP2 919 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 MAP3K20Q9NYL2 800 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 MICAL3Q7RTP6 2002 aa19.1■□□□□ 0.65
SHKBP1-215ENST00000597649 PALM3A6NDB9 673 aaPredicted RBP19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 PRR33A8MZF0 331 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 ZBTB5O15062 677 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 LGALS2P05162 132 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 GPM6BQ13491 265 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 COL19A1Q14993 1142 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 TMEM192Q8IY95 271 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 BANK1Q8NDB2 785 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 DSCC1Q9BVC3 393 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 CTNNA3Q9UI47 895 aa19.09■□□□□ 0.65
SHKBP1-215ENST00000597649 POTEB3A0JP26 581 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 CTSHP09668 335 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 PTPROQ16827 1216 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 IFIT1BQ5T764 474 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 POTEBQ6S5H4 581 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 CYB5R4Q7L1T6 521 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 ALYREFQ86V81 257 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 FCHSD1Q86WN1 690 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 SEPT8Q92599 483 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 YME1L1Q96TA2 773 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 IL25Q9H293 177 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 SETD4Q9NVD3 440 aa19.08■□□□□ 0.64
SHKBP1-215ENST00000597649 CCND2P30279 289 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 MRPS9P82933 396 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 SEMA3FQ13275 785 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 IMMTQ16891 758 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 SAMD3Q8N6K7 520 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 SAMD11Q96NU1 681 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 PIGSQ96S52 555 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 UBAC1Q9BSL1 405 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 KRT23Q9C075 422 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 BAZ2BQ9UIF8 2168 aaKnown RBP19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 MYH6P13533 1939 aa19.07■□□□□ 0.64
SHKBP1-215ENST00000597649 GCOM1H8Y6P7 765 aaPredicted RBP19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 CYTH3O43739 400 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 POLR2MP0CAP2 368 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 ALADP13716 330 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 ADAM17P78536 824 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 PUS10Q3MIT2 529 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 HOMER1Q86YM7 354 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 PABPC5Q96DU9 382 aaKnown RBP19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 RIOX1Q9H6W3 641 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 SENP2Q9HC62 589 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 DIAPH3Q9NSV4 1193 aa19.06■□□□□ 0.64
SHKBP1-215ENST00000597649 SPATA31C2B4DYI2 1134 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 LINC00271P0C7V0 271 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 PDE4AP27815 886 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 ICAM3P32942 547 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 LTBRP36941 435 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 TIGD5Q53EQ6 642 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 CYFIP1Q7L576 1253 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 TRIM50Q86XT4 487 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 UIMC1Q96RL1 719 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 GPR20Q99678 358 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 USP26Q9BXU7 913 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 CNNM2Q9H8M5 875 aa19.05■□□□□ 0.64
SHKBP1-215ENST00000597649 LAMA4Q16363 1823 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 C19orf67A6NJJ6 358 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 CAND2O75155 1236 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 ZP2Q05996 745 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 FAM26DQ5JW98 314 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 METTL7BQ6UX53 244 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 EP400NLQ6ZTU2 488 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 INPP4AQ96PE3 977 aaPredicted RBP19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 IFIH1Q9BYX4 1025 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 NSUN3Q9H649 340 aaKnown RBP19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 RTEL1Q9NZ71 1219 aa19.04■□□□□ 0.64
SHKBP1-215ENST00000597649 DCXO43602 365 aa19.03■□□□□ 0.64
SHKBP1-215ENST00000597649 CHRNA1P02708 482 aa19.03■□□□□ 0.64
SHKBP1-215ENST00000597649 GRM4Q14833 912 aa19.03■□□□□ 0.64
SHKBP1-215ENST00000597649 CTC1Q2NKJ3 1217 aa19.03■□□□□ 0.64
SHKBP1-215ENST00000597649 IL17RAQ96F46 866 aa19.03■□□□□ 0.64
SHKBP1-215ENST00000597649 FRMPD4Q14CM0 1322 aa19.02■□□□□ 0.64
SHKBP1-215ENST00000597649 NOP56O00567 594 aaKnown RBP19.02■□□□□ 0.64
SHKBP1-215ENST00000597649 GRM6O15303 877 aa19.02■□□□□ 0.64
SHKBP1-215ENST00000597649 ARHGAP4P98171 946 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms