RNA–Protein interactions for RNA: ENST00000597304.5

ZNF558-205, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 2,612 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-205ENST00000597304 KCNK3O14649 394 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.2
ZNF558-205ENST00000597304 ZNF844Q08AG5 666 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 GRB10Q13322 594 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 UAP1Q16222 522 aaPredicted RBP13.83□□□□□ -0.2
ZNF558-205ENST00000597304 PARP10Q53GL7 1025 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 ANKRD20A8PQ5CZ79 823 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 ARMC9Q7Z3E5 817 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 PROM2Q8N271 834 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 OSBPL7Q9BZF2 842 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 ZMYND12Q9H0C1 365 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 RIC8AQ9NPQ8 531 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 BCCIPQ9P287 314 aaKnown RBP eCLIP13.83□□□□□ -0.2
ZNF558-205ENST00000597304 MTMR7Q9Y216 660 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 NFS1Q9Y697 457 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 COL4A1P02462 1669 aa13.83□□□□□ -0.2
ZNF558-205ENST00000597304 TMCO5BA8MYB1 307 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 NOL4O94818 638 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 PPP2R2AP63151 447 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 RPS6KA1Q15418 735 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 CACNA2D3Q8IZS8 1091 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 FUKQ8N0W3 1084 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 MCM9Q9NXL9 1143 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 ODF2LQ9ULJ1 636 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 COL4A3BPQ9Y5P4 624 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 A0A087X0T9 212 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 WTIPA6NIX2 430 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-205ENST00000597304 FAM228BP0C875 321 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 TMOD1P28289 359 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 HOXA7P31268 230 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-205ENST00000597304 PPARDQ03181 441 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 MTMR3Q13615 1198 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 RAPGEF1Q13905 1077 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 QPCTQ16769 361 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 AGBL2Q5U5Z8 902 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 UBLCP1Q8WVY7 318 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-205ENST00000597304 ANKS1AQ92625 1134 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 N4BP2L2Q92802 583 aaPredicted RBP13.82□□□□□ -0.2
ZNF558-205ENST00000597304 SGSM3Q96HU1 749 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 SEC16BQ96JE7 1060 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 PACSIN1Q9BY11 444 aa13.82□□□□□ -0.2
ZNF558-205ENST00000597304 DNM1LO00429 736 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 TXKP42681 527 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 ARID5AQ03989 594 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 KLHL30Q0D2K2 578 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 FOXR2Q6PJQ5 311 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 CEP57Q86XR8 500 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 PBKQ96KB5 322 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 C6orf50Q9HD87 102 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 HAUS2Q9NVX0 235 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 C5orf60A6NFR6 353 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 KIF4AO95239 1232 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 NTSR2O95665 410 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 SSBP05455 408 aaKnown RBP eCLIP13.81□□□□□ -0.2
ZNF558-205ENST00000597304 PAEPP09466 180 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 GNA11P29992 359 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 FKBP3Q00688 224 aaKnown RBP13.81□□□□□ -0.2
ZNF558-205ENST00000597304 PSMD2Q13200 908 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 LRRC41Q15345 812 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 SPRED3Q2MJR0 410 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 FAM84BQ96KN1 310 aaPredicted RBP13.81□□□□□ -0.2
ZNF558-205ENST00000597304 ADAMTS1Q9UHI8 967 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 LEMD3Q9Y2U8 911 aa13.81□□□□□ -0.2
ZNF558-205ENST00000597304 SMCO2A6NFE2 343 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 USP17L8P0C7I0 530 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 PDHBP11177 359 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 ORC2Q13416 577 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 ENOX2Q16206 610 aaKnown RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 ASIC2Q16515 512 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 DDX42Q86XP3 938 aaKnown RBP eCLIP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 MYOCDQ8IZQ8 938 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 FAM133AQ8N9E0 248 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 ACTRT1Q8TDG2 376 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 TBCKQ8TEA7 893 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 SCFD2Q8WU76 684 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 P3H4Q92791 437 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 PNMA5Q96PV4 448 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 VEZTQ9HBM0 779 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 TRAF5O00463 557 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 CEP104O60308 925 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 EZRP15311 586 aaKnown RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 SCTRP47872 440 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 NT5C2P49902 561 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 USP11P51784 963 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 IFFO1Q0D2I5 559 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 GKAP1Q5VSY0 366 aaPredicted RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 GLIS3Q8NEA6 775 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 MAGEC3Q8TD91 643 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 RAPGEF5Q92565 580 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 DDX12PQ92771 950 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 SCLT1Q96NL6 688 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 NEUROG2Q9H2A3 272 aa13.8□□□□□ -0.2
ZNF558-205ENST00000597304 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
ZNF558-205ENST00000597304 NIP7Q9Y221 180 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms