RNA–Protein interactions for RNA: ENST00000596172.1

ZNF558-204, Transcript of zinc finger protein 558, humanhuman

TSL 4

Gene ZNF558, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-204ENST00000596172 KAT2BQ92831 832 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 GPR20Q99678 358 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 NFASCO94856 1347 aa20.78■□□□□ 0.92
ZNF558-204ENST00000596172 CEP290O15078 2479 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 NOP56O00567 594 aaKnown RBP20.77■□□□□ 0.92
ZNF558-204ENST00000596172 EDIL3O43854 480 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 F2P00734 622 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 CD4P01730 458 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 CLTBP09497 229 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 ARP10275 920 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 NBPF20Q3BBV1 942 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 KRT25Q7Z3Z0 450 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 KATNAL1Q9BW62 490 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 AGO4Q9HCK5 861 aaKnown RBP20.77■□□□□ 0.92
ZNF558-204ENST00000596172 PDLIM7Q9NR12 457 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 GJB4Q9NTQ9 266 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 PRKAG2Q9UGJ0 569 aa20.77■□□□□ 0.92
ZNF558-204ENST00000596172 ZMYND8Q9ULU4 1186 aaPredicted RBP20.77■□□□□ 0.92
ZNF558-204ENST00000596172 HAS3O00219 553 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 KIAA0355O15063 1070 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 TLR3O15455 904 aaKnown RBP20.76■□□□□ 0.91
ZNF558-204ENST00000596172 SORBS3O60504 671 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 SETQ01105 290 aaPredicted RBP20.76■□□□□ 0.91
ZNF558-204ENST00000596172 NONOQ15233 471 aaKnown RBP eCLIP20.76■□□□□ 0.91
ZNF558-204ENST00000596172 SESTD1Q86VW0 696 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 PLA2G4DQ86XP0 818 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 TBCKQ8TEA7 893 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 TMX3Q96JJ7 454 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 C16orf70Q9BSU1 422 aa20.76■□□□□ 0.91
ZNF558-204ENST00000596172 CYP3A7-CYP3A51PA0A087WV96 503 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 TRIM43BA6NCK2 446 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 CD2BP2O95400 341 aaKnown RBP20.75■□□□□ 0.91
ZNF558-204ENST00000596172 SYN1P17600 705 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 CYP3A7P24462 503 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 TRIM29Q14134 588 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 MOXD1Q6UVY6 613 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 SEPT1Q8WYJ6 367 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 TRIM43Q96BQ3 446 aaPredicted RBP20.75■□□□□ 0.91
ZNF558-204ENST00000596172 SDF4Q9BRK5 362 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 BRMS1Q9HCU9 246 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 TMEM39AQ9NV64 488 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 TBX21Q9UL17 535 aa20.75■□□□□ 0.91
ZNF558-204ENST00000596172 MMP1P03956 469 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 SUPT20HL2P0C7V6 817 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 PSEN2P49810 448 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 ITGB3BPQ13352 177 aaPredicted RBP20.74■□□□□ 0.91
ZNF558-204ENST00000596172 SH3RF1Q7Z6J0 888 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 LENG9Q96B70 501 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 GDF15Q99988 308 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 JPH1Q9HDC5 661 aaPredicted RBP20.74■□□□□ 0.91
ZNF558-204ENST00000596172 SCN10AQ9Y5Y9 1956 aa20.74■□□□□ 0.91
ZNF558-204ENST00000596172 CCDC194A0A1B0GVG4 234 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 H3BRB1 525 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 LGALS2P05162 132 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 ZNF286BP0CG31 522 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 KRT2P35908 639 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 MFSD10Q14728 455 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 Q4G0T1 1027 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 PRR16Q569H4 304 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 KRT40Q6A162 431 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 OXER1Q8TDS5 423 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 TNFRSF25Q93038 417 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 MBOAT7Q96N66 472 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 PRO3102Q9H379 93 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 TUT1Q9H6E5 874 aaKnown RBP20.73■□□□□ 0.91
ZNF558-204ENST00000596172 TBC1D22BQ9NU19 505 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 SLC9A2Q9UBY0 812 aa20.73■□□□□ 0.91
ZNF558-204ENST00000596172 GSTTP1A0A1W2PQM5 241 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 IPO5O00410 1097 aaKnown RBP20.72■□□□□ 0.91
ZNF558-204ENST00000596172 DHX15O43143 795 aaKnown RBP20.72■□□□□ 0.91
ZNF558-204ENST00000596172 B4GALT4O60513 344 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 BMP8BP34820 402 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 KIAA0753Q2KHM9 967 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 ZNF577Q9BSK1 485 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 TRPV6Q9H1D0 765 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 PRDM5Q9NQX1 630 aaPredicted RBP20.72■□□□□ 0.91
ZNF558-204ENST00000596172 PKD2L1Q9P0L9 805 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 TELO2Q9Y4R8 837 aa20.72■□□□□ 0.91
ZNF558-204ENST00000596172 ATG7O95352 703 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 TCF7P36402 384 aaPredicted RBP20.71■□□□□ 0.91
ZNF558-204ENST00000596172 MAGEA10P43363 369 aaPredicted RBP20.71■□□□□ 0.91
ZNF558-204ENST00000596172 INF2Q27J81 1249 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 C7orf31Q8N865 590 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 FAM184AQ8NB25 1140 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 FBXO18Q8NFZ0 1043 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 C8orf76Q96K31 380 aa20.71■□□□□ 0.91
ZNF558-204ENST00000596172 NAP1L4Q99733 375 aaKnown RBP20.71■□□□□ 0.91
ZNF558-204ENST00000596172 LBHD1Q9BQE6 289 aaPredicted RBP20.71■□□□□ 0.91
ZNF558-204ENST00000596172 TIMP1P01033 207 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 GCFC2P16383 781 aaKnown RBP20.7■□□□□ 0.9
ZNF558-204ENST00000596172 SP4Q02446 784 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 NR5A1Q13285 461 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 SAFBQ15424 915 aaKnown RBP eCLIP20.7■□□□□ 0.9
ZNF558-204ENST00000596172 FAM47CQ5HY64 1035 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 PPP4R3AQ6IN85 833 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 PIK3AP1Q6ZUJ8 805 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 NEK8Q86SG6 692 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 DIS3L2Q8IYB7 885 aaKnown RBP20.7■□□□□ 0.9
ZNF558-204ENST00000596172 RIT2Q99578 217 aa20.7■□□□□ 0.9
ZNF558-204ENST00000596172 TRMT13Q9NUP7 481 aaKnown RBP20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms