RNA–Protein interactions for RNA: ENST00000595984.5

COPE-205, Transcript of coatomer protein complex subunit epsilon, human

TSL 3

Gene COPE, Length 434 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPE-205	ENST00000595984	MCM2	P49736	904 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	TLE2	Q04725	743 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	DGKD	Q16760	1214 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	METTL7B	Q6UX53	244 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	NIPA1	Q7RTP0	329 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	ANKRD33	Q7Z3H0	272 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	PLA2G4D	Q86XP0	818 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	TBCK	Q8TEA7	893 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	PPP1R13L	Q8WUF5	828 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	KAT2B	Q92831	832 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	KCNH7	Q9NS40	1196 aa		13.93	□□□□□ -0.18
COPE-205	ENST00000595984	ZNF286B	P0CG31	522 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	CIITA	P33076	1130 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	HMGN5	P82970	282 aa	Known RBP	13.92	□□□□□ -0.18
COPE-205	ENST00000595984	SP4	Q02446	784 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	NBPF20	Q3BBV1	942 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	KRT40	Q6A162	431 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.92	□□□□□ -0.18
COPE-205	ENST00000595984	GPR20	Q99678	358 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	AGO4	Q9HCK5	861 aa	Known RBP	13.92	□□□□□ -0.18
COPE-205	ENST00000595984	PDLIM7	Q9NR12	457 aa		13.92	□□□□□ -0.18
COPE-205	ENST00000595984	KAT6A	Q92794	2004 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	MROH7	Q68CQ1	1323 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	MYH9	P35579	1960 aa	Known RBP	13.91	□□□□□ -0.18
COPE-205	ENST00000595984	NOP56	O00567	594 aa	Known RBP	13.91	□□□□□ -0.18
COPE-205	ENST00000595984	PPFIA4	O75335	1185 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	MMP1	P03956	469 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	KRT2	P35908	639 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	USP11	P51784	963 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	FAAP100	Q0VG06	881 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	NR5A1	Q13285	461 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	ITGB3BP	Q13352	177 aa	Predicted RBP	13.91	□□□□□ -0.18
COPE-205	ENST00000595984	NONO	Q15233	471 aa	Known RBP eCLIP	13.91	□□□□□ -0.18
COPE-205	ENST00000595984	INF2	Q27J81	1249 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	EARS2	Q5JPH6	523 aa	Known RBP	13.91	□□□□□ -0.18
COPE-205	ENST00000595984	KRT25	Q7Z3Z0	450 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	SH3RF1	Q7Z6J0	888 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	FAM126B	Q8IXS8	530 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	TNFRSF25	Q93038	417 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	LENG9	Q96B70	501 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	TOX2	Q96NM4	488 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	UIMC1	Q96RL1	719 aa		13.91	□□□□□ -0.18
COPE-205	ENST00000595984	NFASC	O94856	1347 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	CCDC194	A0A1B0GVG4	234 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	TRIM43B	A6NCK2	446 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	FAM205C	A6NFA0	338 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	DCDC2C	A8MYV0	355 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	HAS3	O00219	553 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	F2	P00734	622 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	CD4	P01730	458 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	LGALS2	P05162	132 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	CLTB	P09497	229 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	PSEN2	P49810	448 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	CHMP4BP1	P59074	171 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	SET	Q01105	290 aa	Predicted RBP	13.9	□□□□□ -0.18
COPE-205	ENST00000595984	GUCY1B3	Q02153	619 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	TRIM29	Q14134	588 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	PRR16	Q569H4	304 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	PIK3AP1	Q6ZUJ8	805 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	TRIM43	Q96BQ3	446 aa	Predicted RBP	13.9	□□□□□ -0.18
COPE-205	ENST00000595984	C8orf76	Q96K31	380 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	C16orf70	Q9BSU1	422 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	SEZ6L	Q9BYH1	1024 aa		13.9	□□□□□ -0.18
COPE-205	ENST00000595984	JPH1	Q9HDC5	661 aa	Predicted RBP	13.9	□□□□□ -0.18
COPE-205	ENST00000595984	PRDM5	Q9NQX1	630 aa	Predicted RBP	13.9	□□□□□ -0.18
COPE-205	ENST00000595984	GSTTP1	A0A1W2PQM5	241 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	BTBD18	B2RXH4	712 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	TLR3	O15455	904 aa	Known RBP	13.89	□□□□□ -0.19
COPE-205	ENST00000595984	DHX15	O43143	795 aa	Known RBP	13.89	□□□□□ -0.19
COPE-205	ENST00000595984	B4GALT4	O60513	344 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	TDP2	O95551	362 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	MFSD10	Q14728	455 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	FAM47C	Q5HY64	1035 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	UTP14C	Q5TAP6	766 aa	Known RBP	13.89	□□□□□ -0.19
COPE-205	ENST00000595984	NFRKB	Q6P4R8	1299 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	TRIM50	Q86XT4	487 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	DIS3L2	Q8IYB7	885 aa	Known RBP	13.89	□□□□□ -0.19
COPE-205	ENST00000595984	FAM184A	Q8NB25	1140 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	SDF4	Q9BRK5	362 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	ZNF577	Q9BSK1	485 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	KATNAL1	Q9BW62	490 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	TRPV6	Q9H1D0	765 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	BRMS1	Q9HCU9	246 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	SLC9A2	Q9UBY0	812 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	CEP290	O15078	2479 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	TANC1	Q9C0D5	1861 aa		13.89	□□□□□ -0.19
COPE-205	ENST00000595984	CYP3A7-CYP3A51P	A0A087WV96	503 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	DDX39A	O00148	427 aa	Known RBP	13.88	□□□□□ -0.19
COPE-205	ENST00000595984	IPO5	O00410	1097 aa	Known RBP	13.88	□□□□□ -0.19
COPE-205	ENST00000595984	KIAA0355	O15063	1070 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	MSH4	O15457	936 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	CYP3A7	P24462	503 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	ITGB8	P26012	769 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	TCF7	P36402	384 aa	Predicted RBP	13.88	□□□□□ -0.19
COPE-205	ENST00000595984	KIAA0753	Q2KHM9	967 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	LETM2	Q2VYF4	491 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984		Q4G0T1	1027 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	MOXD1	Q6UVY6	613 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	NEK8	Q86SG6	692 aa		13.88	□□□□□ -0.19
COPE-205	ENST00000595984	SEPT1	Q8WYJ6	367 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 42 ms