RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 STK24Q9Y6E0 443 aa16.59■□□□□ 0.25
SHKBP1-211ENST00000595945 ASB14A6NK59 587 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 ATP9AO75110 1047 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 SLFN14P0C7P3 912 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 KCNA2P16389 499 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 VEGFBP49765 207 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 MDM2Q00987 491 aaPredicted RBP16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 PDE4DQ08499 809 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 CAMK4Q16566 473 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 GNPTABQ3T906 1256 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 KRT79Q5XKE5 535 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 IQUBQ8NA54 791 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 SNX29Q8TEQ0 813 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 LRRC15Q8TF66 581 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 USP6NLQ92738 828 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 DHX58Q96C10 678 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 CDHR1Q96JP9 859 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 MPHOSPH6Q99547 160 aaKnown RBP16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 UNC45AQ9H3U1 944 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 TBC1D22BQ9NU19 505 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 CASP8AP2Q9UKL3 1982 aa16.58■□□□□ 0.24
SHKBP1-211ENST00000595945 NFASCO94856 1347 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 EML1O00423 815 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 PLCG1P19174 1290 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 RRAGBQ5VZM2 374 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 NCAPH2Q6IBW4 605 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
SHKBP1-211ENST00000595945 KDM3AQ9Y4C1 1321 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 SYCE3A1L190 88 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 MED24O75448 989 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 HOXC6P09630 235 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 CTGFP29279 349 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 ECM1Q16610 540 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 KANK3Q6NY19 840 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 MAMDC4Q6UXC1 1216 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 ARMCX2Q7L311 632 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 CNNM3Q8NE01 707 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 FUCA2Q9BTY2 467 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 POLR3CQ9BUI4 534 aaPredicted RBP16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 CUEDC2Q9H467 287 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 BLOC1S4Q9NUP1 217 aa16.56■□□□□ 0.24
SHKBP1-211ENST00000595945 FOXN1O15353 648 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 SPATA31C1P0DKV0 1188 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 RPA1P27694 616 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 CCT6AP40227 531 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 STAT6P42226 847 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 HTRA3P83110 453 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 MAP2K5Q13163 448 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 EPHA7Q15375 998 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 HAUS3Q68CZ6 603 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 CKAP2LQ8IYA6 745 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 ERMNQ8TAM6 284 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 NPLOC4Q8TAT6 608 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 PAGE5Q96GU1 130 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 MTRQ99707 1265 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 HSD17B14Q9BPX1 270 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 SENP7Q9BQF6 1050 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 EIF2AK1Q9BQI3 630 aaKnown RBP16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 MAGEF1Q9HAY2 307 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 PKD2L1Q9P0L9 805 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 STK17AQ9UEE5 414 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 GJD2Q9UKL4 321 aa16.55■□□□□ 0.24
SHKBP1-211ENST00000595945 CCNE2O96020 404 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 IGHA2P01877 340 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 MUTP22033 750 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 KRT76Q01546 638 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 SP2Q02086 613 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 ZNF746Q6NUN9 644 aaPredicted RBP16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 LRSAM1Q6UWE0 723 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 SEPT14Q6ZU15 432 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 KCNK18Q7Z418 384 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 DPP9Q86TI2 863 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 CEP57L1Q8IYX8 460 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 MSL3Q8N5Y2 521 aaKnown RBP16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 KCTD17Q8N5Z5 321 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 RDM1Q8NG50 284 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 MAML3Q96JK9 1138 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 PLIN2Q99541 437 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 KATNBL1Q9H079 304 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 NT5C3AQ9H0P0 336 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 TUFT1Q9NNX1 390 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 KBTBD4Q9NVX7 518 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 TUBE1Q9UJT0 475 aa16.54■□□□□ 0.24
SHKBP1-211ENST00000595945 SYNGAP1Q96PV0 1343 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 RBM47A0AV96 593 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 DDX39AO00148 427 aaKnown RBP16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 CHMP2AO43633 222 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 SNAI1O95863 264 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 PRR29P0C7W0 189 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 TGFB3P10600 412 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 JAK3P52333 1124 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 LACTBP83111 547 aaPredicted RBP16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 PNOCQ13519 176 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 POSTNQ15063 836 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 CCDC62Q6P9F0 684 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 KCNV1Q6PIU1 500 aa16.53■□□□□ 0.24
SHKBP1-211ENST00000595945 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms