RNA–Protein interactions for RNA: ENST00000595558.1

ZNF541-205, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-205ENST00000595558 CACNB1Q02641 598 aaPredicted RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 GABPAQ06546 454 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 MAN2A1Q16706 1144 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 HGSNATQ68CP4 663 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 SP8Q8IXZ3 490 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 LARP4BQ92615 738 aaKnown RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 MTMR9Q96QG7 549 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 CRAMP1Q96RY5 1269 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 CDK5RAP2Q96SN8 1893 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 SHOX2O60902 331 aaPredicted RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 GDF11O95390 407 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 LCA5LO95447 670 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 MAGEA9P43362 315 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 RNASE9P60153 205 aaKnown RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 ASTE1Q2TB18 679 aaPredicted RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 KLHDC7AQ5VTJ3 777 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 UNC13DQ70J99 1090 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 TANGO6Q9C0B7 1094 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 TBC1D7Q9P0N9 293 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 PACSIN2Q9UNF0 486 aaPredicted RBP16.94■□□□□ 0.3
ZNF541-205ENST00000595558 HYOU1Q9Y4L1 999 aa16.94■□□□□ 0.3
ZNF541-205ENST00000595558 UBR3Q6ZT12 1888 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 TLR2O60603 784 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 NOP2P46087 812 aaKnown RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 NAP1L1P55209 391 aaKnown RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 JAG1P78504 1218 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 TRADDQ15628 312 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 ENOX2Q16206 610 aaKnown RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 CALCRLQ16602 461 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 TTMPQ5BVD1 217 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 CCDC181Q5TID7 509 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 SH2D3CQ8N5H7 860 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 DDX12PQ92771 950 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 PDGFDQ9GZP0 370 aaPredicted RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 NAV1Q8NEY1 1877 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 GLI1P08151 1106 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 FAM153BP0C7A2 387 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 GNA11P29992 359 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 FAM153CQ494X1 144 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 KCTD16Q68DU8 428 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 ZNF572Q7Z3I7 529 aaPredicted RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 ZNF287Q9HBT7 754 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 STIM2Q9P246 746 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.93■□□□□ 0.3
ZNF541-205ENST00000595558 FAM153AQ9UHL3 310 aa16.93■□□□□ 0.3
ZNF541-205ENST00000595558 SEMA3FQ13275 785 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 TDRD12Q587J7 1177 aaKnown RBP16.92■□□□□ 0.3
ZNF541-205ENST00000595558 PDXDC1Q6P996 788 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 SAMD1Q6SPF0 538 aaPredicted RBP16.92■□□□□ 0.3
ZNF541-205ENST00000595558 LZTS2Q9BRK4 669 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 GRIN2DO15399 1336 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 FTCDO95954 541 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 PLCG2P16885 1265 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 ARID5AQ03989 594 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 CCDC70Q6NSX1 233 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 CACNA2D4Q7Z3S7 1137 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 DNAAF5Q86Y56 855 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 RIOX1Q9H6W3 641 aa16.92■□□□□ 0.3
ZNF541-205ENST00000595558 NOL4O94818 638 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 KRT14P02533 472 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 PRLRP16471 622 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 CARSP49589 748 aaKnown RBP16.91■□□□□ 0.3
ZNF541-205ENST00000595558 COBLL1Q53SF7 1204 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 SH3BP5LQ7L8J4 393 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 GUF1Q8N442 669 aaKnown RBP16.91■□□□□ 0.3
ZNF541-205ENST00000595558 SNX29Q8TEQ0 813 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 CDK5RAP3Q96JB5 506 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 ALS2CR12Q96Q35 445 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 SH3GL2Q99962 352 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 COA1Q9GZY4 146 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 TCP1P17987 556 aaKnown RBP16.91■□□□□ 0.3
ZNF541-205ENST00000595558 PPARDQ03181 441 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 SPICE1Q8N0Z3 855 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 RAD54LQ92698 747 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 P2RX7Q99572 595 aaKnown RBP16.91■□□□□ 0.3
ZNF541-205ENST00000595558 CAPS2Q9BXY5 557 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 PACSIN1Q9BY11 444 aa16.91■□□□□ 0.3
ZNF541-205ENST00000595558 KLRG2A4D1S0 409 aaPredicted RBP16.9■□□□□ 0.3
ZNF541-205ENST00000595558 CRKP46108 304 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 GNGT1P63211 74 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 SLC27A3Q5K4L6 730 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 C8orf74Q6P047 294 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 ZIM3Q96PE6 472 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 NFU1Q9UMS0 254 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 NPHP3-ACAD11A0A0J9YXS1 232 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 PALMO75781 387 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 SSBP05455 408 aaKnown RBP eCLIP16.9■□□□□ 0.3
ZNF541-205ENST00000595558 CCDC84Q86UT8 332 aaPredicted RBP16.9■□□□□ 0.3
ZNF541-205ENST00000595558 NELFCDQ8IXH7 590 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 PLCD3Q8N3E9 789 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 BCAS4Q8TDM0 211 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 IFT81Q8WYA0 676 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 BCAS3Q9H6U6 928 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 SAMM50Q9Y512 469 aa16.9■□□□□ 0.3
ZNF541-205ENST00000595558 PVALEFA0A1B0GWK0 134 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 PJA2O43164 708 aa16.89■□□□□ 0.29
ZNF541-205ENST00000595558 TTLL1O95922 423 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms