RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 GJA9P57773 515 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 NKX3-2P78367 333 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 NUCB2P80303 420 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 DHX37Q8IY37 1157 aaKnown RBP25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 GIMAP8Q8ND71 665 aaPredicted RBP25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 UPF3AQ9H1J1 476 aaKnown RBP25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 XPNPEP3Q9NQH7 507 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 TELO2Q9Y4R8 837 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 NFASCO94856 1347 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 SYNRGQ9UMZ2 1314 aa25.53■■□□□ 1.68
SNRNP70-204ENST00000595231 TBX3O15119 743 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 ADAMTS4O75173 837 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 PGK1P00558 417 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 METTL7BQ6UX53 244 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 CRISPLD2Q9H0B8 497 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 SGPL1O95470 568 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 LAMC2Q13753 1193 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 HSDL1Q3SXM5 330 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 OR6J1Q8NGC5 347 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 U2AF1L4Q8WU68 220 aaKnown RBP25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 FAM20AQ96MK3 541 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 RIT2Q99578 217 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 MLXIPQ9HAP2 919 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 TBC1D22BQ9NU19 505 aa25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 CIZ1Q9ULV3 898 aaPredicted RBP25.52■■□□□ 1.68
SNRNP70-204ENST00000595231 MYH15Q9Y2K3 1946 aa25.51■■□□□ 1.67
SNRNP70-204ENST00000595231 PSMD10O75832 226 aa25.51■■□□□ 1.67
SNRNP70-204ENST00000595231 CALCRLQ16602 461 aa25.51■■□□□ 1.67
SNRNP70-204ENST00000595231 FTOQ9C0B1 505 aaKnown RBP eCLIP25.51■■□□□ 1.679e-16■□□□□ 8.5
SNRNP70-204ENST00000595231 OGDHLQ9ULD0 1010 aa25.51■■□□□ 1.67
SNRNP70-204ENST00000595231 KIAA0100Q14667 2235 aaKnown RBP25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 MYADML2A6NDP7 307 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 GJA8P48165 433 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 PTGDRQ13258 359 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 ABHD8Q96I13 439 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 SDF4Q9BRK5 362 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 AP5M1Q9H0R1 490 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 CLIC4Q9Y696 253 aa25.5■■□□□ 1.67
SNRNP70-204ENST00000595231 A6NJR5 290 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 SF3A1Q15459 793 aaKnown RBP25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 LRCH2Q5VUJ6 765 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 KLHDC9Q8NEP7 349 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 AFG1LQ8WV93 481 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 SPATA33Q96N06 139 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 USP28Q96RU2 1077 aa25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 JPH1Q9HDC5 661 aaPredicted RBP25.49■■□□□ 1.67
SNRNP70-204ENST00000595231 CCNE2O96020 404 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 C6orf222P0C671 652 aaPredicted RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 FOXD4L6Q3SYB3 417 aaPredicted RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 B3GNT9Q6UX72 402 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 FOXD4L3Q6VB84 417 aaPredicted RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 SLFN12Q8IYM2 578 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 PPTC7Q8NI37 304 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 TMEM106CQ9BVX2 250 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 SLC9A2Q9UBY0 812 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 DDX39AO00148 427 aaKnown RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 BEX3Q00994 111 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 LRRC41Q15345 812 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 FSCN1Q16658 493 aaKnown RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 CCSAPQ6IQ19 270 aaPredicted RBP25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 SPC25Q9HBM1 224 aa25.48■■□□□ 1.67
SNRNP70-204ENST00000595231 GAS7O60861 476 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 BAG4O95429 457 aaKnown RBP25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 OR52Z1P0C646 297 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 CST5P28325 142 aaPredicted RBP25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 ATP2C1P98194 919 aaPredicted RBP25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 SP4Q02446 784 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 PTPAQ15257 358 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 GNASQ5JWF2 1037 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 TNS4Q8IZW8 715 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 GPR20Q99678 358 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 TFIP11Q9UBB9 837 aaKnown RBP25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 VAV3Q9UKW4 847 aa25.47■■□□□ 1.67
SNRNP70-204ENST00000595231 MMP3P08254 477 aa25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 TXKP42681 527 aa25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 SPIRE1Q08AE8 756 aa25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 TEKT3Q9BXF9 490 aa25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 TTC12Q9H892 705 aaPredicted RBP25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 PCDHA12Q9UN75 941 aa25.46■■□□□ 1.67
SNRNP70-204ENST00000595231 GSTTP1A0A1W2PQM5 241 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 LAD1O00515 517 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 MARCH6O60337 910 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 TFRCP02786 760 aaKnown RBP25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 HOXD8P13378 290 aaPredicted RBP25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 CPT1AP50416 773 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 ACTR2P61160 394 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 CEBPZQ03701 1054 aaKnown RBP25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 DNM1Q05193 864 aaKnown RBP25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 RNF180Q86T96 592 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 ARRDC4Q8NCT1 418 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 CHAMP1Q96JM3 812 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 ZNF396Q96N95 335 aaPredicted RBP25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 UNC45AQ9H3U1 944 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 POLR3EQ9NVU0 708 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 CHMP5Q9NZZ3 219 aa25.45■■□□□ 1.67
SNRNP70-204ENST00000595231 DNAH12Q6ZR08 3092 aa25.45■■□□□ 1.66
SNRNP70-204ENST00000595231 ATG7O95352 703 aa25.45■■□□□ 1.66
SNRNP70-204ENST00000595231 MNX1P50219 401 aaPredicted RBP25.45■■□□□ 1.66
SNRNP70-204ENST00000595231 KRT76Q01546 638 aa25.45■■□□□ 1.66
SNRNP70-204ENST00000595231 PPP2R5CQ13362 524 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms