RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 TUT1Q9H6E5 874 aaKnown RBP19.83■□□□□ 0.77
IRF3-208ENST00000594387 JADE2Q9NQC1 790 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 HDAC6Q9UBN7 1215 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 UBIAD1Q9Y5Z9 338 aa19.83■□□□□ 0.77
IRF3-208ENST00000594387 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.82■□□□□ 0.76
IRF3-208ENST00000594387 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.82■□□□□ 0.76
IRF3-208ENST00000594387 ESYT2A0FGR8 921 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 PITPNM1O00562 1244 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 ACRP10323 421 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 HOXD8P13378 290 aaPredicted RBP19.82■□□□□ 0.76
IRF3-208ENST00000594387 RFC2P35250 354 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 STK3Q13188 491 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 TYW1BQ6NUM6 668 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 ZNF365Q70YC5 407 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 DEFB123Q8N688 67 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 CAGE1Q8TC20 777 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 MXRA8Q9BRK3 442 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 GTF2IRD1Q9UHL9 959 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 TANC1Q9C0D5 1861 aa19.82■□□□□ 0.76
IRF3-208ENST00000594387 UMODL1Q5DID0 1318 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 CDKL5O76039 1030 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 LGALS2P05162 132 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 PFKMP08237 780 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 GNAT1P11488 350 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 ACTN1P12814 892 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 SMAD3P84022 425 aaKnown RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 TMEM240Q5SV17 173 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 UTP14CQ5TAP6 766 aaKnown RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 ZNF697Q5TEC3 545 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 JAKMIP3Q5VZ66 844 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 GDF6Q6KF10 455 aaPredicted RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 REXO1Q8N1G1 1221 aaKnown RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 SDF4Q9BRK5 362 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 ZMYND12Q9H0C1 365 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 SLKQ9H2G2 1235 aaPredicted RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 NCOA5Q9HCD5 579 aaKnown RBP19.81■□□□□ 0.76
IRF3-208ENST00000594387 PKD2L1Q9P0L9 805 aa19.81■□□□□ 0.76
IRF3-208ENST00000594387 HAS3O00219 553 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 ITGB5P18084 799 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 SEMA3FQ13275 785 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 NTRK3Q16288 839 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 SEPT1Q8WYJ6 367 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 SCLYQ96I15 445 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 PGBD1Q96JS3 809 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 GPR20Q99678 358 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 LARP6Q9BRS8 491 aaKnown RBP19.8■□□□□ 0.76
IRF3-208ENST00000594387 C16orf70Q9BSU1 422 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 SH3GLB2Q9NR46 395 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 TMEM260Q9NX78 707 aa19.8■□□□□ 0.76
IRF3-208ENST00000594387 MYH9P35579 1960 aaKnown RBP19.8■□□□□ 0.76
IRF3-208ENST00000594387 C17orf102A2RUQ5 167 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 DEXIO95424 95 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 PARNO95453 639 aaKnown RBP19.79■□□□□ 0.76
IRF3-208ENST00000594387 NLRP5P59047 1200 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 PTK7Q13308 1070 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 PKN1Q16512 942 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 CEP55Q53EZ4 464 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 FAM109BQ6ICB4 259 aaPredicted RBP19.79■□□□□ 0.76
IRF3-208ENST00000594387 DEFB128Q7Z7B8 93 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 AFAP1L1Q8TED9 768 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 FTOQ9C0B1 505 aaKnown RBP eCLIP19.79■□□□□ 0.76
IRF3-208ENST00000594387 WNT8AQ9H1J5 351 aa19.79■□□□□ 0.76
IRF3-208ENST00000594387 ATP9AO75110 1047 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 PPFIA3O75145 1194 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 IQCF3P0C7M6 154 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 KCNA2P16389 499 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 XBP1P17861 261 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 TCF7P36402 384 aaPredicted RBP19.78■□□□□ 0.76
IRF3-208ENST00000594387 SREBF1P36956 1147 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 CLK2P49760 499 aaKnown RBP19.78■□□□□ 0.76
IRF3-208ENST00000594387 ARHGAP4P98171 946 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 C16orf59Q7L2K0 433 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 HERVK_113Q902F9 699 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 GLG1Q92896 1179 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 TNPO1Q92973 898 aaKnown RBP19.78■□□□□ 0.76
IRF3-208ENST00000594387 BCAS3Q9H6U6 928 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 KCNH7Q9NS40 1196 aa19.78■□□□□ 0.76
IRF3-208ENST00000594387 GBF1Q92538 1859 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 ZBBXA8MT70 800 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 OTOP2Q7RTS6 562 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 ATP6V0A1Q93050 837 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 C22orf23Q9BZE7 217 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 SMARCAD1Q9H4L7 1026 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 AZI2Q9H6S1 392 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 JPH1Q9HDC5 661 aaPredicted RBP19.77■□□□□ 0.76
IRF3-208ENST00000594387 VPS54Q9P1Q0 977 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 SLC9A2Q9UBY0 812 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 TCEAL9Q9UHQ7 104 aa19.77■□□□□ 0.76
IRF3-208ENST00000594387 SMIM10L2AP0DMW4 78 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 SMIM10L2BP0DMW5 78 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 SELPP16109 830 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 Q7L0L9 218 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 NIPA1Q7RTP0 329 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 PLA2G4DQ86XP0 818 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 FAM177A1Q8N128 213 aaPredicted RBP19.76■□□□□ 0.75
IRF3-208ENST00000594387 ERAP1Q9NZ08 941 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 SLC4A7Q9Y6M7 1214 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 NFASCO94856 1347 aa19.76■□□□□ 0.75
IRF3-208ENST00000594387 MEIS1O00470 390 aa19.75■□□□□ 0.75
IRF3-208ENST00000594387 CYP3A4P08684 503 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms