RNA–Protein interactions for RNA: ENST00000593597.1

USE1-203, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2

Gene USE1, Length 587 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-203ENST00000593597 ICAM3P32942 547 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 ERVK-21P61565 698 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
USE1-203ENST00000593597 ADAM17P78536 824 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 SAMD3Q8N6K7 520 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 DBF4BQ8NFT6 615 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 MAP4K1Q92918 833 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 GPR20Q99678 358 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 RNPEPQ9H4A4 650 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 MTUS1Q9ULD2 1270 aa12.35□□□□□ -0.43
USE1-203ENST00000593597 U3KPZ7 1027 aaPredicted RBP12.35□□□□□ -0.43
USE1-203ENST00000593597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 SPATA31C2B4DYI2 1134 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 KIF28PB7ZC32 967 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 H3BRB1 525 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 MEIS2O14770 477 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 GTPBP6O43824 516 aaPredicted RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 PLEKHA8P1O95397 391 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 TGFB3P10600 412 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 THPOP40225 353 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 HTRA4P83105 476 aaPredicted RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 SKIV2LQ15477 1246 aaKnown RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 KCNV1Q6PIU1 500 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 USP17L6PQ6QN14 398 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 CYFIP1Q7L576 1253 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 NCOA7Q8NI08 942 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 SP7Q8TDD2 431 aaPredicted RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 RAD9AQ99638 391 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 TUT1Q9H6E5 874 aaKnown RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 RTEL1Q9NZ71 1219 aa12.34□□□□□ -0.43
USE1-203ENST00000593597 RBM8AQ9Y5S9 174 aaKnown RBP12.34□□□□□ -0.43
USE1-203ENST00000593597 TRIOO75962 3097 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 RSPH10B2B2RC85 870 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 CTSHP09668 335 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 RSPH10BP0C881 870 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 TRDNQ13061 729 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 METTL7BQ6UX53 244 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 CMTR1Q8N1G2 835 aaKnown RBP12.33□□□□□ -0.44
USE1-203ENST00000593597 SRBD1Q8N5C6 995 aaKnown RBP12.33□□□□□ -0.44
USE1-203ENST00000593597 ATP6V0A1Q93050 837 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 SPZ1Q9BXG8 430 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 LSG1Q9H089 658 aaKnown RBP12.33□□□□□ -0.44
USE1-203ENST00000593597 MLXIPQ9HAP2 919 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 CD320Q9NPF0 282 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 SETD4Q9NVD3 440 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 WDR81Q562E7 1941 aa12.33□□□□□ -0.44
USE1-203ENST00000593597 SH2B2O14492 632 aaPredicted RBP12.32□□□□□ -0.44
USE1-203ENST00000593597 ATP9AO75110 1047 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 LINC00271P0C7V0 271 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 RXRAP19793 462 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 IKBKEQ14164 716 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 RUFY4Q6ZNE9 571 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 RALYLQ86SE5 291 aaKnown RBP12.32□□□□□ -0.44
USE1-203ENST00000593597 RAB11FIP4Q86YS3 637 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 LMBR1Q8WVP7 490 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 TGS1Q96RS0 853 aaKnown RBP12.32□□□□□ -0.44
USE1-203ENST00000593597 ZBED2Q9BTP6 218 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 TSPYL2Q9H2G4 693 aaPredicted RBP12.32□□□□□ -0.44
USE1-203ENST00000593597 EPHX3Q9H6B9 360 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 COG5Q9UP83 839 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 TTC3P53804 2025 aa12.32□□□□□ -0.44
USE1-203ENST00000593597 hCG_1642624A0A1W2PR95 340 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 PIK3CDO00329 1044 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 FIBPO43427 364 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 PRC1O43663 620 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 KCNA2P16389 499 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 ITGB5P18084 799 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 SP4Q02446 784 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 PCNX4Q63HM2 1172 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 CATIPQ7Z7H3 387 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 SKAP1Q86WV1 359 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 MYOCDQ8IZQ8 938 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 RUFY2Q8WXA3 655 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 HLA-CQ95604 372 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 ZBTB10Q96DT7 871 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 MAP3K14Q99558 947 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 C11orf16Q9NQ32 467 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 LMCD1Q9NZU5 365 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 EMSYQ7Z589 1322 aa12.31□□□□□ -0.44
USE1-203ENST00000593597 PLXNA4Q9HCM2 1894 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.3□□□□□ -0.44
USE1-203ENST00000593597 GSTTP1A0A1W2PQM5 241 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 ERICH2A1L162 156 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 EFCAB14O75071 495 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 STAM2O75886 525 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 DDAH1O94760 285 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 MGAT3Q09327 533 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 NEDD9Q14511 834 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 UBE2SQ16763 222 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 AAK1Q2M2I8 961 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 FAM26DQ5JW98 314 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 UTP14CQ5TAP6 766 aaKnown RBP12.3□□□□□ -0.44
USE1-203ENST00000593597 IL27Q8NEV9 243 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 LRRC2Q9BYS8 371 aa12.3□□□□□ -0.44
USE1-203ENST00000593597 RC3H2Q9HBD1 1191 aaKnown RBP12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms