RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 CD4P01730 458 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 DGKDQ16760 1214 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 NBPF20Q3BBV1 942 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 BRDTQ58F21 947 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-206ENST00000592942 NIPA1Q7RTP0 329 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 FAM126BQ8IXS8 530 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 PPP1R13LQ8WUF5 828 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 WASF1Q92558 559 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 TRIM43Q96BQ3 446 aaPredicted RBP17.46■□□□□ 0.39
TRIM47-206ENST00000592942 TMX3Q96JJ7 454 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 CDHR1Q96JP9 859 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 GPR20Q99678 358 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 C16orf70Q9BSU1 422 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
TRIM47-206ENST00000592942 PDLIM7Q9NR12 457 aa17.46■□□□□ 0.39
TRIM47-206ENST00000592942 DOCK5Q9H7D0 1870 aa17.46■□□□□ 0.38
TRIM47-206ENST00000592942 HAS3O00219 553 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 DHX15O43143 795 aaKnown RBP17.45■□□□□ 0.38
TRIM47-206ENST00000592942 PQBP1O60828 265 aaKnown RBP17.45■□□□□ 0.38
TRIM47-206ENST00000592942 ITGB8P26012 769 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 USP11P51784 963 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 ITGB3BPQ13352 177 aaPredicted RBP17.45■□□□□ 0.38
TRIM47-206ENST00000592942 EARS2Q5JPH6 523 aaKnown RBP17.45■□□□□ 0.38
TRIM47-206ENST00000592942 TBCKQ8TEA7 893 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 TNFRSF25Q93038 417 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 LENG9Q96B70 501 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 PRO3102Q9H379 93 aa17.45■□□□□ 0.38
TRIM47-206ENST00000592942 GSTTP1A0A1W2PQM5 241 aa17.44■□□□□ 0.38
TRIM47-206ENST00000592942 PLA2G4DQ86XP0 818 aa17.44■□□□□ 0.38
TRIM47-206ENST00000592942 GIMAP8Q8ND71 665 aaPredicted RBP17.44■□□□□ 0.38
TRIM47-206ENST00000592942 SEZ6LQ9BYH1 1024 aa17.44■□□□□ 0.38
TRIM47-206ENST00000592942 PKD2L1Q9P0L9 805 aa17.44■□□□□ 0.38
TRIM47-206ENST00000592942 CYP3A7-CYP3A51PA0A087WV96 503 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 KIAA0355O15063 1070 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 B4GALT4O60513 344 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 F2P00734 622 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 CLTBP09497 229 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 ZNF286BP0CG31 522 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 XBP1P17861 261 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 CYP3A7P24462 503 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 ZNF76P36508 570 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 NR5A1Q13285 461 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 KRT40Q6A162 431 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 NFRKBQ6P4R8 1299 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 MBOAT7Q96N66 472 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 GDF15Q99988 308 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 TRPV6Q9H1D0 765 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 TBX21Q9UL17 535 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 NFASCO94856 1347 aa17.43■□□□□ 0.38
TRIM47-206ENST00000592942 DCDC2CA8MYV0 355 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 MMP1P03956 469 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 LGALS2P05162 132 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 MCM2P49736 904 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 PSEN2P49810 448 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 HIC1Q14526 733 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 KRT25Q7Z3Z0 450 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 UIMC1Q96RL1 719 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 CTAGE1Q96RT6 745 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 COLQQ9Y215 455 aaPredicted RBP17.42■□□□□ 0.38
TRIM47-206ENST00000592942 MROH7Q68CQ1 1323 aa17.42■□□□□ 0.38
TRIM47-206ENST00000592942 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 FAM205CA6NFA0 338 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 BTBD18B2RXH4 712 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 ATG7O95352 703 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 MAGEA10P43363 369 aaPredicted RBP17.41■□□□□ 0.38
TRIM47-206ENST00000592942 FOSBP53539 338 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 HMGN5P82970 282 aaKnown RBP17.41■□□□□ 0.38
TRIM47-206ENST00000592942 SP4Q02446 784 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 MFSD10Q14728 455 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 NONOQ15233 471 aaKnown RBP eCLIP17.41■□□□□ 0.38
TRIM47-206ENST00000592942 INF2Q27J81 1249 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 KIAA0753Q2KHM9 967 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 PRR16Q569H4 304 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 SESTD1Q86VW0 696 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 SEPT1Q8WYJ6 367 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 PCYT2Q99447 389 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 TRMT13Q9NUP7 481 aaKnown RBP17.41■□□□□ 0.38
TRIM47-206ENST00000592942 TMEM39AQ9NV64 488 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 CEP290O15078 2479 aa17.41■□□□□ 0.38
TRIM47-206ENST00000592942 H3BRB1 525 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 IPO5O00410 1097 aaKnown RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 NOP56O00567 594 aaKnown RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 TDP2O95551 362 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 CCNE2O96020 404 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 KRT2P35908 639 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 GUCY1B3Q02153 619 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 PTPN11Q06124 597 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 Q4G0T1 1027 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 PIK3AP1Q6ZUJ8 805 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 FBXO18Q8NFZ0 1043 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 TUT1Q9H6E5 874 aaKnown RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 JPH1Q9HDC5 661 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 PRDM5Q9NQX1 630 aaPredicted RBP17.4■□□□□ 0.38
TRIM47-206ENST00000592942 HDAC6Q9UBN7 1215 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 SLC9A2Q9UBY0 812 aa17.4■□□□□ 0.38
TRIM47-206ENST00000592942 RANBP2P49792 3224 aaKnown RBP17.39■□□□□ 0.37
TRIM47-206ENST00000592942 MSH4O15457 936 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 LGR5O75473 907 aa17.39■□□□□ 0.37
TRIM47-206ENST00000592942 TCF7P36402 384 aaPredicted RBP17.39■□□□□ 0.37
TRIM47-206ENST00000592942 MDM2Q00987 491 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms