RNA–Protein interactions for RNA: ENST00000592395.5

TCF3-216, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 996 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-216ENST00000592395 TLE2Q04725 743 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 ITGA7Q13683 1181 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 HSDL1Q3SXM5 330 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 NIPA1Q7RTP0 329 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 TOX2Q96NM4 488 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 KCNJ14Q9UNX9 436 aa21.23■□□□□ 0.99
TCF3-216ENST00000592395 PQBP1O60828 265 aaKnown RBP21.22■□□□□ 0.99
TCF3-216ENST00000592395 HOXD8P13378 290 aaPredicted RBP21.22■□□□□ 0.99
TCF3-216ENST00000592395 KCNA2P16389 499 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 MCM2P49736 904 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 PSMC6P62333 389 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 CYFIP1Q7L576 1253 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 SLC43A3Q8NBI5 491 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 CYP2W1Q8TAV3 490 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 KCNH7Q9NS40 1196 aa21.22■□□□□ 0.99
TCF3-216ENST00000592395 ZMYND8Q9ULU4 1186 aaPredicted RBP21.22■□□□□ 0.99
TCF3-216ENST00000592395 DCDC2CA8MYV0 355 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 MEIS1O00470 390 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 NOP56O00567 594 aaKnown RBP21.21■□□□□ 0.99
TCF3-216ENST00000592395 ATP9AO75110 1047 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 PPFIA4O75335 1185 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 FXR2P51116 673 aaKnown RBP eCLIP21.21■□□□□ 0.991e-7■■■□□ 18.6
TCF3-216ENST00000592395 CHRDL2Q6WN34 429 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 BCAS3Q9H6U6 928 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 GJB4Q9NTQ9 266 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 GRIN2DO15399 1336 aa21.21■□□□□ 0.99
TCF3-216ENST00000592395 CLTBP09497 229 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 SYN1P17600 705 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 CIITAP33076 1130 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 HMGN5P82970 282 aaKnown RBP21.2■□□□□ 0.98
TCF3-216ENST00000592395 KRT25Q7Z3Z0 450 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 FAM126BQ8IXS8 530 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 PDLIM7Q9NR12 457 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 PRKAG2Q9UGJ0 569 aa21.2■□□□□ 0.98
TCF3-216ENST00000592395 IGLV3-22A0A075B6J6 115 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 FAM86B1E9PN63 330 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 CD2BP2O95400 341 aaKnown RBP21.19■□□□□ 0.98
TCF3-216ENST00000592395 FAM86B2P0C5J1 330 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 ARP10275 920 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 USP11P51784 963 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 SETQ01105 290 aaPredicted RBP21.19■□□□□ 0.98
TCF3-216ENST00000592395 TRIM29Q14134 588 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 PLA2G4DQ86XP0 818 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 TBCKQ8TEA7 893 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 FAM212AQ96EL1 285 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 GPR20Q99678 358 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 KATNAL1Q9BW62 490 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 AGO4Q9HCK5 861 aaKnown RBP21.19■□□□□ 0.98
TCF3-216ENST00000592395 PKD2L1Q9P0L9 805 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 LTBP2Q14767 1821 aa21.19■□□□□ 0.98
TCF3-216ENST00000592395 TLR3O15455 904 aaKnown RBP21.18■□□□□ 0.98
TCF3-216ENST00000592395 F2P00734 622 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 ZNF286BP0CG31 522 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 FAAP100Q0VG06 881 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 NONOQ15233 471 aaKnown RBP eCLIP21.18■□□□□ 0.98
TCF3-216ENST00000592395 NBPF20Q3BBV1 942 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 NFRKBQ6P4R8 1299 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 KAT2BQ92831 832 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 TMX3Q96JJ7 454 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 SDF4Q9BRK5 362 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 BRMS1Q9HCU9 246 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 PRDM5Q9NQX1 630 aaPredicted RBP21.18■□□□□ 0.98
TCF3-216ENST00000592395 NFASCO94856 1347 aa21.18■□□□□ 0.98
TCF3-216ENST00000592395 CCDC194A0A1B0GVG4 234 aa21.17■□□□□ 0.98
TCF3-216ENST00000592395 KRT2P35908 639 aa21.17■□□□□ 0.98
TCF3-216ENST00000592395 PTPN11Q06124 597 aaPredicted RBP21.17■□□□□ 0.98
TCF3-216ENST00000592395 JPH1Q9HDC5 661 aaPredicted RBP21.17■□□□□ 0.98
TCF3-216ENST00000592395 CD4P01730 458 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 MMP1P03956 469 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 LGALS2P05162 132 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 SP4Q02446 784 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 FAM47CQ5HY64 1035 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 KRT40Q6A162 431 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 SH3RF1Q7Z6J0 888 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 FAM184AQ8NB25 1140 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 OXER1Q8TDS5 423 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 C16orf70Q9BSU1 422 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 TMEM39AQ9NV64 488 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 SLC9A2Q9UBY0 812 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 CEP290O15078 2479 aa21.16■□□□□ 0.98
TCF3-216ENST00000592395 TRIM43BA6NCK2 446 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 HAS3O00219 553 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 KIAA0355O15063 1070 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 EDIL3O43854 480 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 PSEN2P49810 448 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 FOSBP53539 338 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 CHMP4BP1P59074 171 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 ITGB3BPQ13352 177 aaPredicted RBP21.15■□□□□ 0.98
TCF3-216ENST00000592395 MFSD10Q14728 455 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 PRR16Q569H4 304 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 MOXD1Q6UVY6 613 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 SESTD1Q86VW0 696 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 SEPT1Q8WYJ6 367 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 TRIM43Q96BQ3 446 aaPredicted RBP21.15■□□□□ 0.98
TCF3-216ENST00000592395 TBX21Q9UL17 535 aa21.15■□□□□ 0.98
TCF3-216ENST00000592395 FARP1Q9Y4F1 1045 aaPredicted RBP21.15■□□□□ 0.98
TCF3-216ENST00000592395 IPO5O00410 1097 aaKnown RBP21.14■□□□□ 0.97
TCF3-216ENST00000592395 B4GALT4O60513 344 aa21.14■□□□□ 0.97
TCF3-216ENST00000592395 INF2Q27J81 1249 aa21.14■□□□□ 0.97
TCF3-216ENST00000592395 KIAA0753Q2KHM9 967 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms