RNA–Protein interactions for RNA: ENST00000591645.1

TPM4-214, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 653 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-214ENST00000591645 GRK2P25098 689 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 GRK3P35626 688 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 ADAM9Q13443 819 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 SERINC3Q13530 473 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 YOD1Q5VVQ6 348 aaPredicted RBP5.64□□□□□ -1.51
TPM4-214ENST00000591645 TEPPQ6URK8 271 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 OTOP3Q7RTS5 596 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 TRIM48Q8IWZ4 208 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 WRNIP1Q96S55 665 aa5.64□□□□□ -1.51
TPM4-214ENST00000591645 HIRIP3Q9BW71 556 aaPredicted RBP5.64□□□□□ -1.51
TPM4-214ENST00000591645 LRG1P02750 347 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 RBL2Q08999 1139 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 MTERF2Q49AM1 385 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 KCNT2Q6UVM3 1135 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 SPATC1Q76KD6 591 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 SCUBE1Q8IWY4 988 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 IFNL3Q8IZI9 196 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 UHMK1Q8TAS1 419 aaKnown RBP5.63□□□□□ -1.51
TPM4-214ENST00000591645 PIP4K2CQ8TBX8 421 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 TMEM209Q96SK2 561 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 SYT3Q9BQG1 590 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 PPARGC1AQ9UBK2 798 aaKnown RBP5.63□□□□□ -1.51
TPM4-214ENST00000591645 NUB1Q9Y5A7 615 aa5.63□□□□□ -1.51
TPM4-214ENST00000591645 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 WNT9AO14904 365 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 ZNF28P17035 718 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 SPIRE1Q08AE8 756 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 LONRF2Q1L5Z9 754 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 HHIPL2Q6UWX4 724 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 MAMDC2Q7Z304 686 aaPredicted RBP5.62□□□□□ -1.51
TPM4-214ENST00000591645 FERMT3Q86UX7 667 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 ZBTB38Q8NAP3 1195 aaPredicted RBP5.62□□□□□ -1.51
TPM4-214ENST00000591645 JAM3Q9BX67 310 aa5.62□□□□□ -1.51
TPM4-214ENST00000591645 CYP7B1O75881 506 aa5.61□□□□□ -1.51
TPM4-214ENST00000591645 SUMO1P63165 101 aaKnown RBP5.61□□□□□ -1.51
TPM4-214ENST00000591645 SSRP1Q08945 709 aaKnown RBP5.61□□□□□ -1.51
TPM4-214ENST00000591645 RASA3Q14644 834 aa5.61□□□□□ -1.51
TPM4-214ENST00000591645 PUM1Q14671 1186 aaKnown RBP eCLIP5.61□□□□□ -1.514e-6■■□□□ 14.4
TPM4-214ENST00000591645 UBXN11Q5T124 520 aa5.61□□□□□ -1.51
TPM4-214ENST00000591645 KRTAP5-3Q6L8H2 238 aa5.61□□□□□ -1.51
TPM4-214ENST00000591645 CLIC6Q96NY7 704 aa5.61□□□□□ -1.51
TPM4-214ENST00000591645 ASXL2Q76L83 1435 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 TRBV23-1A0A0A0MS06 115 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 BLACEA4D250 179 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 FAM47E-STBD1D6RA91 191 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 AQP7O14520 342 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 SOD2P04179 222 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 GNAT1P11488 350 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 GTF2F1P35269 517 aaKnown RBP eCLIP5.6□□□□□ -1.51
TPM4-214ENST00000591645 EPHA5P54756 1037 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 KIAA2012Q0VF49 1180 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 RGL3Q3MIN7 710 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 ZC3H12BQ5HYM0 836 aaKnown RBP5.6□□□□□ -1.51
TPM4-214ENST00000591645 PROSER1Q86XN7 944 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 PTPRN2Q92932 1015 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 ALG1Q9BT22 464 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 DUSP10Q9Y6W6 482 aa5.6□□□□□ -1.51
TPM4-214ENST00000591645 MROH6A6NGR9 719 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 SLC27A2O14975 620 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 DIAPH1O60610 1272 aaKnown RBP5.59□□□□□ -1.51
TPM4-214ENST00000591645 C6orf222P0C671 652 aaPredicted RBP5.59□□□□□ -1.51
TPM4-214ENST00000591645 CNR2P34972 360 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 TUSC3Q13454 348 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 STK32CQ86UX6 486 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 FAM124AQ86V42 546 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 DTX3Q8N9I9 347 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 TXNDC5Q8NBS9 432 aaKnown RBP5.59□□□□□ -1.51
TPM4-214ENST00000591645 CLEC4DQ8WXI8 215 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 MKL1Q969V6 931 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 YTHDC1Q96MU7 727 aaKnown RBP5.59□□□□□ -1.51
TPM4-214ENST00000591645 GPR20Q99678 358 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 PPP1R1BQ9UD71 204 aaPredicted RBP5.59□□□□□ -1.51
TPM4-214ENST00000591645 WASF3Q9UPY6 502 aa5.59□□□□□ -1.51
TPM4-214ENST00000591645 K7ESM1 405 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 DDX3XO00571 662 aaKnown RBP eCLIP5.58□□□□□ -1.52
TPM4-214ENST00000591645 CHGBP05060 677 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 FAHP16930 419 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 NAT1P18440 290 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 PAK1Q13153 545 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 SF3A1Q15459 793 aaKnown RBP5.58□□□□□ -1.52
TPM4-214ENST00000591645 SOGA3Q5TF21 947 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 BORAQ6PGQ7 559 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.58□□□□□ -1.52
TPM4-214ENST00000591645 LGI4Q8N135 537 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 ZCCHC14Q8WYQ9 949 aaKnown RBP5.58□□□□□ -1.52
TPM4-214ENST00000591645 DEPDC7Q96QD5 511 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 CDC6Q99741 560 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 IPPKQ9H8X2 491 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 DLL4Q9NR61 685 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 PFDN2Q9UHV9 154 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 DSEQ9UL01 958 aa5.58□□□□□ -1.52
TPM4-214ENST00000591645 ARVCFO00192 962 aa5.57□□□□□ -1.52
TPM4-214ENST00000591645 NKRFO15226 690 aaKnown RBP eCLIP5.57□□□□□ -1.52
TPM4-214ENST00000591645 ITGB3P05106 788 aa5.57□□□□□ -1.52
TPM4-214ENST00000591645 FAM153BP0C7A2 387 aa5.57□□□□□ -1.52
TPM4-214ENST00000591645 IL13P35225 146 aa5.57□□□□□ -1.52
TPM4-214ENST00000591645 MLLT6P55198 1093 aaPredicted RBP5.57□□□□□ -1.52
TPM4-214ENST00000591645 GABREP78334 506 aa5.57□□□□□ -1.52
TPM4-214ENST00000591645 PAN2Q504Q3 1202 aaKnown RBP5.57□□□□□ -1.52
TPM4-214ENST00000591645 FAM209AQ5JX71 171 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms