RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 HAND2P61296 217 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 TRAF1Q13077 416 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 ADGRE1Q14246 886 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 STXBP2Q15833 593 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 RETREG3Q86VR2 466 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 SCUBE3Q8IX30 993 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 CAGE1Q8TC20 777 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 UHRF1Q96T88 793 aaPredicted RBP11□□□□□ -0.65
BRCA1-226ENST00000591534 KATNAL1Q9BW62 490 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 CTNNA3Q9UI47 895 aa11□□□□□ -0.65
BRCA1-226ENST00000591534 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
BRCA1-226ENST00000591534 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
BRCA1-226ENST00000591534 A0A0D9SFI3 127 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 DHX16O60231 1041 aaKnown RBP10.99□□□□□ -0.65
BRCA1-226ENST00000591534 GH1P01241 217 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 IQCF3P0C7M6 154 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 CHMP4BP1P59074 171 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 NMIQ13287 307 aaPredicted RBP10.99□□□□□ -0.65
BRCA1-226ENST00000591534 PTGISQ16647 500 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 USH1GQ495M9 461 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 ASPRV1Q53RT3 343 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 TMEM63BQ5T3F8 832 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 RASGRP2Q7LDG7 609 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 MICALL1Q8N3F8 863 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 PNMA1Q8ND90 353 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 AFAP1L1Q8TED9 768 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 PRM3Q9NNZ6 103 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 COG5Q9UP83 839 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 PCDHB3Q9Y5E6 796 aa10.99□□□□□ -0.65
BRCA1-226ENST00000591534 EFCAB14O75071 495 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 EIF3JO75822 258 aaKnown RBP10.98□□□□□ -0.65
BRCA1-226ENST00000591534 CA3P07451 260 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 POU3F3P20264 500 aaPredicted RBP10.98□□□□□ -0.65
BRCA1-226ENST00000591534 PTGS1P23219 599 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 NR6A1Q15406 480 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 DGKDQ16760 1214 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 IMMTQ16891 758 aaKnown RBP10.98□□□□□ -0.65
BRCA1-226ENST00000591534 ARHGEF16Q5VV41 709 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 SESTD1Q86VW0 696 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 HERC6Q8IVU3 1022 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 C7orf31Q8N865 590 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 KRT23Q9C075 422 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 CNNM2Q9H8M5 875 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 DIAPH3Q9NSV4 1193 aa10.98□□□□□ -0.65
BRCA1-226ENST00000591534 MAP3K20Q9NYL2 800 aaKnown RBP10.98□□□□□ -0.65
BRCA1-226ENST00000591534 TLL1O43897 1013 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 PARP1P09874 1014 aaKnown RBP10.97□□□□□ -0.65
BRCA1-226ENST00000591534 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 SELPP16109 830 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 SDSP20132 328 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 NUCB1Q02818 461 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 LAMC2Q13753 1193 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 CDC37Q16543 378 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-226ENST00000591534 BRICD5Q6PL45 260 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 SEPT14Q6ZU15 432 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 ZNF589Q86UQ0 364 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-226ENST00000591534 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 SAMD3Q8N6K7 520 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 ANKS1AQ92625 1134 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 KCTD12Q96CX2 325 aaKnown RBP10.97□□□□□ -0.65
BRCA1-226ENST00000591534 ZSCAN10Q96SZ4 725 aaPredicted RBP10.97□□□□□ -0.65
BRCA1-226ENST00000591534 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 UBAC1Q9BSL1 405 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 PRR14Q9BWN1 585 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 C1QTNF1Q9BXJ1 281 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 CHD9Q3L8U1 2897 aa10.97□□□□□ -0.65
BRCA1-226ENST00000591534 GPR37L1O60883 481 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 MMP3P08254 477 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 MYOGP15173 224 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 CCDC62Q6P9F0 684 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 CHST3Q7LGC8 479 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 CHD1LQ86WJ1 897 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 TBC1D10CQ8IV04 446 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 ADGRF4Q8IZF3 695 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 SYTL5Q8TDW5 730 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-226ENST00000591534 ARNTL2Q8WYA1 636 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 COPS5Q92905 334 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 EMID1Q96A84 441 aaPredicted RBP10.96□□□□□ -0.65
BRCA1-226ENST00000591534 ZKSCAN3Q9BRR0 538 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 AMNQ9BXJ7 453 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 LMCD1Q9NZU5 365 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 MRVI1Q9Y6F6 885 aa10.96□□□□□ -0.65
BRCA1-226ENST00000591534 TTC28Q96AY4 2481 aa10.96□□□□□ -0.66
BRCA1-226ENST00000591534 MCM3APO60318 1980 aa10.96□□□□□ -0.66
BRCA1-226ENST00000591534 ABHD14A-ACY1A0A1B0GW23 586 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 TRDNQ13061 729 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 IKBKEQ14164 716 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 LY6KQ17RY6 165 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 IFIT1BQ5T764 474 aaKnown RBP10.95□□□□□ -0.66
BRCA1-226ENST00000591534 CNKSR3Q6P9H4 555 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 CWC27Q6UX04 472 aaKnown RBP10.95□□□□□ -0.66
BRCA1-226ENST00000591534 LRRC8DQ7L1W4 858 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 DHX37Q8IY37 1157 aaKnown RBP10.95□□□□□ -0.66
BRCA1-226ENST00000591534 PPTC7Q8NI37 304 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 THAP11Q96EK4 314 aa10.95□□□□□ -0.66
BRCA1-226ENST00000591534 TAAR1Q96RJ0 339 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms