RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 GDF6Q6KF10 455 aaPredicted RBP25.55■■□□□ 1.68
MBD3-208ENST00000590830 SESTD1Q86VW0 696 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 CCDC12Q8WUD4 166 aaPredicted RBP25.55■■□□□ 1.68
MBD3-208ENST00000590830 CRYGNQ8WXF5 182 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 AIFM3Q96NN9 605 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 ALG1Q9BT22 464 aa25.55■■□□□ 1.68
MBD3-208ENST00000590830 SLKQ9H2G2 1235 aaPredicted RBP25.55■■□□□ 1.68
MBD3-208ENST00000590830 SUPT20HL2P0C7V6 817 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 ARP10275 920 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 NEK4P51957 841 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 MTMR1Q13613 665 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 HIC1Q14526 733 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 KIAA0753Q2KHM9 967 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 TRIM22Q8IYM9 498 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 RASGRP4Q8TDF6 673 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 CDHR1Q96JP9 859 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 WNT8AQ9H1J5 351 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 PKD2L1Q9P0L9 805 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 HDAC6Q9UBN7 1215 aa25.54■■□□□ 1.68
MBD3-208ENST00000590830 SLC34A2O95436 690 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 LARGE1O95461 756 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 CTDNEP1O95476 244 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 GNA11P29992 359 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 CCL23P55773 120 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 ARHGAP4P98171 946 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 ANKRD1Q15327 319 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 CEP55Q53EZ4 464 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 VWCEQ96DN2 955 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 SH3GLB2Q9NR46 395 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 KCNH7Q9NS40 1196 aa25.53■■□□□ 1.68
MBD3-208ENST00000590830 MEIS1O00470 390 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 NOP56O00567 594 aaKnown RBP25.52■■□□□ 1.68
MBD3-208ENST00000590830 MAFGO15525 162 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 EDIL3O43854 480 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 DEXIO95424 95 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 LGALS2P05162 132 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 SP4Q02446 784 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 ME3Q16798 604 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 REXO1Q8N1G1 1221 aaKnown RBP25.52■■□□□ 1.68
MBD3-208ENST00000590830 TMEM199Q8N511 208 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 NECAB1Q8N987 351 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 GIMAP8Q8ND71 665 aaPredicted RBP25.52■■□□□ 1.68
MBD3-208ENST00000590830 KIF2CQ99661 725 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 KATNAL1Q9BW62 490 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 GTF2IRD1Q9UHL9 959 aa25.52■■□□□ 1.68
MBD3-208ENST00000590830 GSTTP1A0A1W2PQM5 241 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 FAM86B1E9PN63 330 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 CYP3A4P08684 503 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 FAM86B2P0C5J1 330 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 PTGISQ16647 500 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 CPLX2Q6PUV4 134 aaKnown RBP25.51■■□□□ 1.67
MBD3-208ENST00000590830 C7orf31Q8N865 590 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 CCDC148Q8NFR7 591 aa25.51■■□□□ 1.67
MBD3-208ENST00000590830 H3BRB1 525 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 ACRP10323 421 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 NLRP5P59047 1200 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 ZNF200P98182 395 aaPredicted RBP25.5■■□□□ 1.67
MBD3-208ENST00000590830 NPY5RQ15761 445 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 TMEM240Q5SV17 173 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 TRIM50Q86XT4 487 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 SCLYQ96I15 445 aa25.5■■□□□ 1.67
MBD3-208ENST00000590830 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.5■■□□□ 1.679e-6■■■■■ 27.7
MBD3-208ENST00000590830 TUT1Q9H6E5 874 aaKnown RBP25.5■■□□□ 1.67
MBD3-208ENST00000590830 AGO4Q9HCK5 861 aaKnown RBP25.5■■□□□ 1.67
MBD3-208ENST00000590830 IGLV3-22A0A075B6J6 115 aa25.49■■□□□ 1.67
MBD3-208ENST00000590830 ITGB3BPQ13352 177 aaPredicted RBP25.49■■□□□ 1.67
MBD3-208ENST00000590830 PPIGQ13427 754 aaKnown RBP eCLIP25.49■■□□□ 1.673e-9■■□□□ 12.7
MBD3-208ENST00000590830 UTP14CQ5TAP6 766 aaKnown RBP25.49■■□□□ 1.67
MBD3-208ENST00000590830 MCTP2Q6DN12 878 aa25.49■■□□□ 1.67
MBD3-208ENST00000590830 BICD2Q8TD16 824 aa25.49■■□□□ 1.67
MBD3-208ENST00000590830 DHX38Q92620 1227 aaKnown RBP25.49■■□□□ 1.67
MBD3-208ENST00000590830 DOCK5Q9H7D0 1870 aa25.49■■□□□ 1.67
MBD3-208ENST00000590830 ZNF76P36508 570 aa25.48■■□□□ 1.67
MBD3-208ENST00000590830 NIPA1Q7RTP0 329 aa25.48■■□□□ 1.67
MBD3-208ENST00000590830 IL23AQ9NPF7 189 aa25.48■■□□□ 1.67
MBD3-208ENST00000590830 PCDHA4Q9UN74 947 aa25.48■■□□□ 1.67
MBD3-208ENST00000590830 LAMA2P24043 3122 aaKnown RBP25.48■■□□□ 1.67
MBD3-208ENST00000590830 M0R2N6 131 aa25.47■■□□□ 1.67
MBD3-208ENST00000590830 FDPSP14324 419 aaKnown RBP25.47■■□□□ 1.67
MBD3-208ENST00000590830 TCF7P36402 384 aaPredicted RBP25.47■■□□□ 1.67
MBD3-208ENST00000590830 ZNF365Q70YC5 407 aa25.47■■□□□ 1.67
MBD3-208ENST00000590830 SEPT1Q8WYJ6 367 aa25.47■■□□□ 1.67
MBD3-208ENST00000590830 GJB4Q9NTQ9 266 aa25.47■■□□□ 1.67
MBD3-208ENST00000590830 NOD1Q9Y239 953 aa25.47■■□□□ 1.67
MBD3-208ENST00000590830 NFASCO94856 1347 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 STK36Q9NRP7 1315 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 RBAK-RBAKDNI3L0D1 243 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 CDKL5O76039 1030 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 HOXC8P31273 242 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 ST3GAL1Q11201 340 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 PLA2G4DQ86XP0 818 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 WNT8BQ93098 351 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 GTF3C6Q969F1 213 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 UIMC1Q96RL1 719 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 C22orf23Q9BZE7 217 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 RNPEPQ9H4A4 650 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 KCNJ14Q9UNX9 436 aa25.46■■□□□ 1.67
MBD3-208ENST00000590830 IQCF3P0C7M6 154 aa25.45■■□□□ 1.66
MBD3-208ENST00000590830 SMIM10L2AP0DMW4 78 aa25.45■■□□□ 1.66
MBD3-208ENST00000590830 SMIM10L2BP0DMW5 78 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms