RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 CXCL17Q6UXB2 119 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 NECAB2Q7Z6G3 386 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 PPTC7Q8NI37 304 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 CCDC194A0A1B0GVG4 234 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 GSTTP1A0A1W2PQM5 241 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 MYCNP04198 464 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-229ENST00000590704 TOB1P50616 345 aaPredicted RBP23.94■■□□□ 1.42
CIRBP-229ENST00000590704 NEDD9Q14511 834 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 LARP1BQ659C4 914 aaKnown RBP23.94■■□□□ 1.42
CIRBP-229ENST00000590704 PPP4R3AQ6IN85 833 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 NEK8Q86SG6 692 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 ETNPPLQ8TBG4 499 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 CDHR1Q96JP9 859 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 GPR20Q99678 358 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 PKD2L1Q9P0L9 805 aa23.94■■□□□ 1.42
CIRBP-229ENST00000590704 NFASCO94856 1347 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 ZNF76P36508 570 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 SNX17Q15036 470 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 LRRC26Q2I0M4 334 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 B3GNT9Q6UX72 402 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 HSCBQ8IWL3 235 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 PCSK9Q8NBP7 692 aaKnown RBP23.93■■□□□ 1.42
CIRBP-229ENST00000590704 C16orf70Q9BSU1 422 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 SPC25Q9HBM1 224 aa23.93■■□□□ 1.42
CIRBP-229ENST00000590704 KBTBD13C9JR72 458 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 CCNE2O96020 404 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 CDK7P50613 346 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 LETM2Q2VYF4 491 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 SLC39A5Q6ZMH5 540 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 NOSTRINQ8IVI9 506 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 SLC43A3Q8NBI5 491 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 HAS1Q92839 578 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 SPATA33Q96N06 139 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 PCYT2Q99447 389 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 MLXIPQ9HAP2 919 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 BRMS1Q9HCU9 246 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 KCNMB3Q9NPA1 279 aa23.92■■□□□ 1.42
CIRBP-229ENST00000590704 IPO5O00410 1097 aaKnown RBP23.91■■□□□ 1.42
CIRBP-229ENST00000590704 PPFIA4O75335 1185 aa23.91■■□□□ 1.42
CIRBP-229ENST00000590704 ATG7O95352 703 aa23.91■■□□□ 1.42
CIRBP-229ENST00000590704 SYT1P21579 422 aa23.91■■□□□ 1.42
CIRBP-229ENST00000590704 CPT1AP50416 773 aa23.91■■□□□ 1.42
CIRBP-229ENST00000590704 SLC5A5Q92911 643 aa23.91■■□□□ 1.42
CIRBP-229ENST00000590704 PSMD10O75832 226 aa23.9■■□□□ 1.42
CIRBP-229ENST00000590704 PSMC6P62333 389 aa23.9■■□□□ 1.42
CIRBP-229ENST00000590704 ELP1O95163 1332 aa23.9■■□□□ 1.42
CIRBP-229ENST00000590704 HAS3O00219 553 aa23.89■■□□□ 1.42
CIRBP-229ENST00000590704 SETQ01105 290 aaPredicted RBP23.89■■□□□ 1.42
CIRBP-229ENST00000590704 SAFBQ15424 915 aaKnown RBP eCLIP23.89■■□□□ 1.42
CIRBP-229ENST00000590704 C1orf53Q5VUE5 145 aa23.89■■□□□ 1.42
CIRBP-229ENST00000590704 PPP1R13LQ8WUF5 828 aa23.89■■□□□ 1.42
CIRBP-229ENST00000590704 MYL3P08590 195 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 ATN1P54259 1190 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-229ENST00000590704 C4orf32Q8N8J7 132 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 GIMAP8Q8ND71 665 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-229ENST00000590704 ZNF577Q9BSK1 485 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 TMEM60Q9H2L4 133 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 SLC9A2Q9UBY0 812 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 DDX25Q9UHL0 483 aaKnown RBP23.88■■□□□ 1.41
CIRBP-229ENST00000590704 MTMR6Q9Y217 621 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 KIF3AQ9Y496 699 aa23.88■■□□□ 1.41
CIRBP-229ENST00000590704 IGKV6D-21A0A0A0MT36 114 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 CCNT1O60563 726 aaKnown RBP23.87■■□□□ 1.41
CIRBP-229ENST00000590704 NBR1Q14596 966 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 DGKDQ16760 1214 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 POTEDQ86YR6 584 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 MTMR9Q96QG7 549 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 POLR3EQ9NVU0 708 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 PDE4DIPQ5VU43 2346 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 F2P00734 622 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 GCFC2P16383 781 aaKnown RBP23.87■■□□□ 1.41
CIRBP-229ENST00000590704 ACTR2P61160 394 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 SP4Q02446 784 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 HIC1Q14526 733 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 ABHD15Q6UXT9 468 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 SEPT1Q8WYJ6 367 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 MTG1Q9BT17 334 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-229ENST00000590704 JPH1Q9HDC5 661 aaPredicted RBP23.87■■□□□ 1.41
CIRBP-229ENST00000590704 STARD7Q9NQZ5 370 aa23.87■■□□□ 1.41
CIRBP-229ENST00000590704 KPNA6O60684 536 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 LGR5O75473 907 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 CABYRO75952 493 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 LGALS2P05162 132 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 ZNF286BP0CG31 522 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 TRIM50Q86XT4 487 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 SPRYD3Q8NCJ5 442 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 GLT1D1Q96MS3 346 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 RIT2Q99578 217 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 TBC1D22BQ9NU19 505 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 PCDH10Q9P2E7 1040 aa23.86■■□□□ 1.41
CIRBP-229ENST00000590704 DDX39AO00148 427 aaKnown RBP23.85■■□□□ 1.41
CIRBP-229ENST00000590704 ARVCFO00192 962 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 ZEB2O60315 1214 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 TCF7P36402 384 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-229ENST00000590704 SPIRE1Q08AE8 756 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 ITGA7Q13683 1181 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 NBPF20Q3BBV1 942 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 CTAGE1Q96RT6 745 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 PCDHB6Q9Y5E3 794 aa23.85■■□□□ 1.41
CIRBP-229ENST00000590704 RESTQ13127 1097 aa23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms