RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 CYP2W1Q8TAV3 490 aa13.55□□□□□ -0.24
LIG3-213ENST00000590630 KATNAL1Q9BW62 490 aa13.55□□□□□ -0.24
LIG3-213ENST00000590630 PDLIM7Q9NR12 457 aa13.55□□□□□ -0.24
LIG3-213ENST00000590630 ZMYND8Q9ULU4 1186 aaPredicted RBP13.55□□□□□ -0.24
LIG3-213ENST00000590630 KCNJ14Q9UNX9 436 aa13.55□□□□□ -0.24
LIG3-213ENST00000590630 KAT6AQ92794 2004 aa13.55□□□□□ -0.24
LIG3-213ENST00000590630 LAMA3Q16787 3333 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 IGLV3-22A0A075B6J6 115 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 FAM86B1E9PN63 330 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 SORBS3O60504 671 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 ATP9AO75110 1047 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 F2P00734 622 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 FAM86B2P0C5J1 330 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 SYN1P17600 705 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 CIITAP33076 1130 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 HMGN5P82970 282 aaKnown RBP13.54□□□□□ -0.24
LIG3-213ENST00000590630 PTPN11Q06124 597 aaPredicted RBP13.54□□□□□ -0.24
LIG3-213ENST00000590630 FAAP100Q0VG06 881 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 TRIM29Q14134 588 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 NBPF20Q3BBV1 942 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 KRT25Q7Z3Z0 450 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 KAT2BQ92831 832 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 GPR20Q99678 358 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 BCAS3Q9H6U6 928 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 BRMS1Q9HCU9 246 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
LIG3-213ENST00000590630 TRIOBPQ9H2D6 2365 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 NFASCO94856 1347 aa13.54□□□□□ -0.24
LIG3-213ENST00000590630 WDR81Q562E7 1941 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 KIAA0355O15063 1070 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 DTNBO60941 627 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 CD4P01730 458 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 ZNF286BP0CG31 522 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 ARP10275 920 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 NONOQ15233 471 aaKnown RBP eCLIP13.53□□□□□ -0.24
LIG3-213ENST00000590630 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 TBCKQ8TEA7 893 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 SDF4Q9BRK5 362 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 AGO4Q9HCK5 861 aaKnown RBP13.53□□□□□ -0.24
LIG3-213ENST00000590630 JPH1Q9HDC5 661 aaPredicted RBP13.53□□□□□ -0.24
LIG3-213ENST00000590630 GJB4Q9NTQ9 266 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 TMEM39AQ9NV64 488 aa13.53□□□□□ -0.24
LIG3-213ENST00000590630 MYH9P35579 1960 aaKnown RBP13.52□□□□□ -0.24
LIG3-213ENST00000590630 TRIP12Q14669 1992 aaPredicted RBP13.52□□□□□ -0.24
LIG3-213ENST00000590630 CCDC194A0A1B0GVG4 234 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 TRIM43BA6NCK2 446 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 HAS3O00219 553 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 IPO5O00410 1097 aaKnown RBP13.52□□□□□ -0.25
LIG3-213ENST00000590630 CD2BP2O95400 341 aaKnown RBP13.52□□□□□ -0.25
LIG3-213ENST00000590630 MMP1P03956 469 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 LGALS2P05162 132 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 SUPT20HL2P0C7V6 817 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 KRT2P35908 639 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 SP4Q02446 784 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 PRR16Q569H4 304 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 MOXD1Q6UVY6 613 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 SH3RF1Q7Z6J0 888 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 SESTD1Q86VW0 696 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 TRIM43Q96BQ3 446 aaPredicted RBP13.52□□□□□ -0.25
LIG3-213ENST00000590630 TMX3Q96JJ7 454 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 LBHD1Q9BQE6 289 aaPredicted RBP13.52□□□□□ -0.25
LIG3-213ENST00000590630 C16orf70Q9BSU1 422 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 PKD2L1Q9P0L9 805 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 SLC9A2Q9UBY0 812 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 TBX21Q9UL17 535 aa13.52□□□□□ -0.25
LIG3-213ENST00000590630 H3BRB1 525 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 B4GALT4O60513 344 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 TCF7P36402 384 aaPredicted RBP13.51□□□□□ -0.25
LIG3-213ENST00000590630 MAGEA10P43363 369 aaPredicted RBP13.51□□□□□ -0.25
LIG3-213ENST00000590630 PSEN2P49810 448 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 CHMP4BP1P59074 171 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 ITGB3BPQ13352 177 aaPredicted RBP13.51□□□□□ -0.25
LIG3-213ENST00000590630 MFSD10Q14728 455 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 KRT40Q6A162 431 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 C7orf31Q8N865 590 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 FAM184AQ8NB25 1140 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 OXER1Q8TDS5 423 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 SEPT1Q8WYJ6 367 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 LENG9Q96B70 501 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 GDF15Q99988 308 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 ZNF577Q9BSK1 485 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 TRPV6Q9H1D0 765 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 TUT1Q9H6E5 874 aaKnown RBP13.51□□□□□ -0.25
LIG3-213ENST00000590630 TBC1D22BQ9NU19 505 aa13.51□□□□□ -0.25
LIG3-213ENST00000590630 ZNF215Q9UL58 517 aaPredicted RBP13.51□□□□□ -0.25
LIG3-213ENST00000590630 CYP3A7-CYP3A51PA0A087WV96 503 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 EDIL3O43854 480 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 RAG1P15918 1043 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 CYP3A7P24462 503 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 BMP8BP34820 402 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 INF2Q27J81 1249 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 Q4G0T1 1027 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 CHRDL2Q6WN34 429 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 PIK3AP1Q6ZUJ8 805 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 NEK8Q86SG6 692 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 TNFRSF25Q93038 417 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 C8orf76Q96K31 380 aa13.5□□□□□ -0.25
LIG3-213ENST00000590630 NAP1L4Q99733 375 aaKnown RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms