RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.81□□□□□ -0.2
TPM4-212ENST00000590180 MXRA8Q9BRK3 442 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 RNF26Q9BY78 433 aaPredicted RBP13.81□□□□□ -0.2
TPM4-212ENST00000590180 ANO3Q9BYT9 981 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 IL23AQ9NPF7 189 aa13.81□□□□□ -0.2
TPM4-212ENST00000590180 H3BRB1 525 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 MAFGO15525 162 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 FGBP02675 491 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 LGALS2P05162 132 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 HOXD8P13378 290 aaPredicted RBP13.8□□□□□ -0.2
TPM4-212ENST00000590180 AP3B2Q13367 1082 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 BFSP2Q13515 415 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 TMEM240Q5SV17 173 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 SESTD1Q86VW0 696 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 CYP2W1Q8TAV3 490 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 GPR20Q99678 358 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 C16orf70Q9BSU1 422 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 ZMYND12Q9H0C1 365 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
TPM4-212ENST00000590180 TUT1Q9H6E5 874 aaKnown RBP13.8□□□□□ -0.2
TPM4-212ENST00000590180 VPS54Q9P1Q0 977 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 GTF2IRD1Q9UHL9 959 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 NID2Q14112 1375 aa13.8□□□□□ -0.2
TPM4-212ENST00000590180 ESYT2A0FGR8 921 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 HAS3O00219 553 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 F2P00734 622 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 KCNA2P16389 499 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 CLK2P49760 499 aaKnown RBP13.79□□□□□ -0.2
TPM4-212ENST00000590180 NLRP5P59047 1200 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 ZNF200P98182 395 aaPredicted RBP13.79□□□□□ -0.2
TPM4-212ENST00000590180 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 MCTP2Q6DN12 878 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 PSRC1Q6PGN9 363 aaPredicted RBP13.79□□□□□ -0.2
TPM4-212ENST00000590180 DEFB128Q7Z7B8 93 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 REXO1Q8N1G1 1221 aaKnown RBP13.79□□□□□ -0.2
TPM4-212ENST00000590180 CCDC148Q8NFR7 591 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 BICD2Q8TD16 824 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 SEPT1Q8WYJ6 367 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 WNT8AQ9H1J5 351 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 KCNH7Q9NS40 1196 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 TELO2Q9Y4R8 837 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 SCN10AQ9Y5Y9 1956 aa13.79□□□□□ -0.2
TPM4-212ENST00000590180 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.78□□□□□ -0.2
TPM4-212ENST00000590180 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.78□□□□□ -0.2
TPM4-212ENST00000590180 ADAMTS3O15072 1205 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 IQCF3P0C7M6 154 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 ARP10275 920 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 SREBF1P36956 1147 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 ARHGAP4P98171 946 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 CEP55Q53EZ4 464 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 GPR153Q6NV75 609 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 Q7L0L9 218 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 OTOP2Q7RTS6 562 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 DEFB123Q8N688 67 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 CCDC155Q8N6L0 562 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 SDF4Q9BRK5 362 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 FTOQ9C0B1 505 aaKnown RBP eCLIP13.78□□□□□ -0.2
TPM4-212ENST00000590180 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 LTBP2Q14767 1821 aa13.78□□□□□ -0.2
TPM4-212ENST00000590180 GSTTP1A0A1W2PQM5 241 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 C17orf102A2RUQ5 167 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 MEIS1O00470 390 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 CDKL5O76039 1030 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 DEXIO95424 95 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 SMIM10L2AP0DMW4 78 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 SMIM10L2BP0DMW5 78 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 TCF7P36402 384 aaPredicted RBP13.77□□□□□ -0.21
TPM4-212ENST00000590180 NEK4P51957 841 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 AK2P54819 239 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 SCRN1Q12765 414 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 PLA2G4DQ86XP0 818 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 RASGRP4Q8TDF6 673 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 GLG1Q92896 1179 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 UIMC1Q96RL1 719 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 MTIF3Q9H2K0 278 aaKnown RBP13.77□□□□□ -0.21
TPM4-212ENST00000590180 RNPEPQ9H4A4 650 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 SH3GLB2Q9NR46 395 aa13.77□□□□□ -0.21
TPM4-212ENST00000590180 ZNF215Q9UL58 517 aaPredicted RBP13.77□□□□□ -0.21
TPM4-212ENST00000590180 ZBBXA8MT70 800 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 PFKFB2O60825 505 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 CYP3A4P08684 503 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 SMAD3P84022 425 aaKnown RBP13.76□□□□□ -0.21
TPM4-212ENST00000590180 PTK7Q13308 1070 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 TRIM50Q86XT4 487 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 CAGE1Q8TC20 777 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 HERVK_113Q902F9 699 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 ATP6V0A1Q93050 837 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 FAM161BQ96MY7 647 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 CTAGE1Q96RT6 745 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 AGO4Q9HCK5 861 aaKnown RBP13.76□□□□□ -0.21
TPM4-212ENST00000590180 JPH1Q9HDC5 661 aaPredicted RBP13.76□□□□□ -0.21
TPM4-212ENST00000590180 SETD4Q9NVD3 440 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 SLC9A2Q9UBY0 812 aa13.76□□□□□ -0.21
TPM4-212ENST00000590180 DDX39AO00148 427 aaKnown RBP13.75□□□□□ -0.21
TPM4-212ENST00000590180 DTNBO60941 627 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 GNAT1P11488 350 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 SELPP16109 830 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 RFC2P35250 354 aa13.75□□□□□ -0.21
TPM4-212ENST00000590180 HIC1Q14526 733 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms