RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 QRICH1Q2TAL8 776 aa14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 ZNF589Q86UQ0 364 aaPredicted RBP14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 SEPT8Q92599 483 aa14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 SPATA33Q96N06 139 aa14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 PNMA2Q9UL42 364 aa14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 DOCK5Q9H7D0 1870 aa14.94□□□□□ -0.02
PRKCSH-210ENST00000589990 NEDD4P46934 1319 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 C17orf102A2RUQ5 167 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 TMEM221A6NGB7 291 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 M0R296 226 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 STXBP3O00186 592 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 PPFIA4O75335 1185 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 CFBP00751 764 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 SMIM10L2AP0DMW4 78 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 SMIM10L2BP0DMW5 78 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 MYCLP12524 364 aaPredicted RBP14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 UBA1P22314 1058 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 SMAD4Q13485 552 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 CELF3Q5SZQ8 465 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 TRIM67Q6ZTA4 783 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 FIBCD1Q8N539 461 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 PBXIP1Q96AQ6 731 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 RNPEPQ9H4A4 650 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 RC3H2Q9HBD1 1191 aaKnown RBP14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 VAT1LQ9HCJ6 419 aa14.93□□□□□ -0.02
PRKCSH-210ENST00000589990 KIAA1671Q9BY89 1806 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 C5orf67F2Z3F1 127 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 DNAJB1P25685 340 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 BMPR1AP36894 532 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 VCPP55072 806 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 GPATCH4Q5T3I0 446 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 ADGRD2Q7Z7M1 963 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 IL17RAQ96F46 866 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 TTC14Q96N46 770 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 PDCD2LQ9BRP1 358 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 CHMP4BQ9H444 224 aaKnown RBP14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 JMJD4Q9H9V9 463 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 CD207Q9UJ71 328 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 SALL3Q9BXA9 1300 aa14.92□□□□□ -0.02
PRKCSH-210ENST00000589990 H3BRB1 525 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 ST18O60284 1047 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 PPP1R11O60927 126 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 LGALS2P05162 132 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 HSPD1P10809 573 aaKnown RBP14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 MX1P20591 662 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 HOXA13P31271 388 aaPredicted RBP14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 PTPN5P54829 565 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 ADAM15Q13444 863 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 BMP8AQ7Z5Y6 402 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 TRIM50Q86XT4 487 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 MCF2L2Q86YR7 1114 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 MSLNLQ96KJ4 702 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 POP1Q99575 1024 aaKnown RBP14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 TUT1Q9H6E5 874 aaKnown RBP14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 SETD4Q9NVD3 440 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 CLEC1BQ9P126 229 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 PCDHGC5Q9Y5F6 944 aa14.91□□□□□ -0.02
PRKCSH-210ENST00000589990 WDR87Q6ZQQ6 2873 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 HSD17B4P51659 736 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 ZXDAP98168 799 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 MFSD6Q6ZSS7 791 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 C11orf84Q9BUA3 381 aaPredicted RBP14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 MRPL11Q9Y3B7 192 aaKnown RBP14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 PLXNA3P51805 1871 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 ADGRA3Q8IWK6 1321 aa14.9□□□□□ -0.02
PRKCSH-210ENST00000589990 VPS13AQ96RL7 3174 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 NCK2O43639 380 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 GFRA3O60609 400 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 CHRNA1P02708 482 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 GHRP10912 638 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 RRP1P56182 461 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 RBM10P98175 930 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 PGM5Q15124 567 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 VSIG10LQ86VR7 867 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 CLP1Q92989 425 aaKnown RBP14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 LMAN2LQ9H0V9 348 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 HELLSQ9NRZ9 838 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
PRKCSH-210ENST00000589990 DCHS1Q96JQ0 3298 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 LOC730098B7Z3J9 87 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 DHX16O60231 1041 aaKnown RBP14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 EYA4O95677 639 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 GLP2RO95838 553 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 MMP1P03956 469 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 RB1P06400 928 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 NDUFV1P49821 464 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 NMIQ13287 307 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 RUFY4Q6ZNE9 571 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 STOX1Q6ZVD7 989 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 STAG2Q8N3U4 1231 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 FBXL6Q8N531 539 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 LINC01599Q8WXQ3 324 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 MLXIPQ9HAP2 919 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 RCAN3Q9UKA8 241 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 BARX2Q9UMQ3 279 aaPredicted RBP14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 PLAGL2Q9UPG8 496 aa14.88□□□□□ -0.03
PRKCSH-210ENST00000589990 TTC3P53804 2025 aa14.87□□□□□ -0.03
PRKCSH-210ENST00000589990 ADAM17P78536 824 aa14.87□□□□□ -0.03
PRKCSH-210ENST00000589990 SEMA3FQ13275 785 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms