RNA–Protein interactions for RNA: ENST00000589867.2

MBD1-221, Transcript of methyl-CpG binding domain protein 1, human

TSL 3

Gene MBD1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MBD1-221	ENST00000589867	C9orf50	Q5SZB4	431 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	NLRX1	Q86UT6	975 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	SESTD1	Q86VW0	696 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	LBHD1	Q9BQE6	289 aa	Predicted RBP	19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	NOC4L	Q9BVI4	516 aa	Known RBP	19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	MLXIP	Q9HAP2	919 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	C6orf50	Q9HD87	102 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	GJB4	Q9NTQ9	266 aa		19.79	■□□□□ 0.76
MBD1-221	ENST00000589867	IGLV3-22	A0A075B6J6	115 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	FAM86B1	E9PN63	330 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	RBAK-RBAKDN	I3L0D1	243 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	MEIS1	O00470	390 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	CYP3A4	P08684	503 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	FAM86B2	P0C5J1	330 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	CYP2C9	P11712	490 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	RAG1	P15918	1043 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	CYP2C18	P33260	490 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	PSEN2	P49810	448 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	MTMR1	Q13613	665 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	GDF6	Q6KF10	455 aa	Predicted RBP	19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	C16orf59	Q7L2K0	433 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	TRIM22	Q8IYM9	498 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	TDH	Q8IZJ6	230 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	REXO1	Q8N1G1	1221 aa	Known RBP	19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	GTF3C6	Q969F1	213 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	PPP1R12C	Q9BZL4	782 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	WNT8A	Q9H1J5	351 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	KCNH7	Q9NS40	1196 aa		19.78	■□□□□ 0.76
MBD1-221	ENST00000589867	STK36	Q9NRP7	1315 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	TLR3	O15455	904 aa	Known RBP	19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	LGALS2	P05162	132 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	GNA11	P29992	359 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	PTPN11	Q06124	597 aa	Predicted RBP	19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	ITGB3BP	Q13352	177 aa	Predicted RBP	19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	MFSD10	Q14728	455 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	CEP55	Q53EZ4	464 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	MFSD5	Q6N075	450 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	CCDC12	Q8WUD4	166 aa	Predicted RBP	19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	C22orf23	Q9BZE7	217 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	EHMT1	Q9H9B1	1298 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	PKD2L1	Q9P0L9	805 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	HDAC6	Q9UBN7	1215 aa		19.77	■□□□□ 0.76
MBD1-221	ENST00000589867	SCN5A	Q14524	2016 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	GSTTP1	A0A1W2PQM5	241 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	SHH	Q15465	462 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	KIAA0753	Q2KHM9	967 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	TRIM50	Q86XT4	487 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	DAGLB	Q8NCG7	672 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	NSUN7	Q8NE18	718 aa	Known RBP	19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	CCDC148	Q8NFR7	591 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	AGO4	Q9HCK5	861 aa	Known RBP	19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	GTF2IRD1	Q9UHL9	959 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	KCNJ14	Q9UNX9	436 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	TET1	Q8NFU7	2136 aa		19.76	■□□□□ 0.75
MBD1-221	ENST00000589867	MAFG	O15525	162 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	JAK2	O60674	1132 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	HOXC8	P31273	242 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	NLRP5	P59047	1200 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	ZNF200	P98182	395 aa	Predicted RBP	19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	SP4	Q02446	784 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	FAM47C	Q5HY64	1035 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	CPLX2	Q6PUV4	134 aa	Known RBP	19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	NIPA1	Q7RTP0	329 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	DHX38	Q92620	1227 aa	Known RBP	19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	LENG9	Q96B70	501 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	CDHR1	Q96JP9	859 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	PCYT2	Q99447	389 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	ALG1	Q9BT22	464 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	HIPK3	Q9H422	1215 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	PCDHA4	Q9UN74	947 aa		19.75	■□□□□ 0.75
MBD1-221	ENST00000589867	DHX15	O43143	795 aa	Known RBP	19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	CSF2RA	P15509	400 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	CIITA	P33076	1130 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	CHMP4BP1	P59074	171 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	LRIT3	Q3SXY7	679 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	WNT8B	Q93098	351 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	PHF20	Q9BVI0	1012 aa		19.74	■□□□□ 0.75
MBD1-221	ENST00000589867	ORC3	Q9UBD5	711 aa	Predicted RBP	19.74	■□□□□ 0.75
MBD1-221	ENST00000589867		H3BRB1	525 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	CDKL5	O76039	1030 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	FPGS	Q05932	587 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	BLID	Q8IZY5	108 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	GIMAP8	Q8ND71	665 aa	Predicted RBP	19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	BICD2	Q8TD16	824 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	LRCH3	Q96II8	777 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	KATNAL1	Q9BW62	490 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	TUT1	Q9H6E5	874 aa	Known RBP	19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	NFASC	O94856	1347 aa		19.73	■□□□□ 0.75
MBD1-221	ENST00000589867	NOP56	O00567	594 aa	Known RBP	19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	CCNE2	O96020	404 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	SUPT20HL2	P0C7V6	817 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	TCF7	P36402	384 aa	Predicted RBP	19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	CCL23	P55773	120 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	PTGIS	Q16647	500 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	TRIM71	Q2Q1W2	868 aa	Known RBP	19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	UTP14C	Q5TAP6	766 aa	Known RBP	19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	MCTP2	Q6DN12	878 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	PLA2G4D	Q86XP0	818 aa		19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	FAM177A1	Q8N128	213 aa	Predicted RBP	19.72	■□□□□ 0.75
MBD1-221	ENST00000589867	OXER1	Q8TDS5	423 aa		19.72	■□□□□ 0.75

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