RNA–Protein interactions for RNA: ENST00000589420.1

ZNF397-206, Transcript of zinc finger protein 397, humanhuman

TSL 1 (best)

Gene ZNF397, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-206ENST00000589420 USP26Q9BXU7 913 aa12.71□□□□□ -0.37
ZNF397-206ENST00000589420 TUT1Q9H6E5 874 aaKnown RBP12.71□□□□□ -0.37
ZNF397-206ENST00000589420 RBM8AQ9Y5S9 174 aaKnown RBP12.71□□□□□ -0.37
ZNF397-206ENST00000589420 C17orf102A2RUQ5 167 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 RSPH10B2B2RC85 870 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 PIK3CDO00329 1044 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 FIBPO43427 364 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 LGALS2P05162 132 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 RSPH10BP0C881 870 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 HOXC8P31273 242 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 THPOP40225 353 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 GNAQP50148 359 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 MRPS9P82933 396 aaKnown RBP12.7□□□□□ -0.38
ZNF397-206ENST00000589420 GRB10Q13322 594 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 HIC1Q14526 733 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 MBTPS1Q14703 1052 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 XRRA1Q6P2D8 792 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 CASC1Q6TDU7 716 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 TMCO2Q7Z6W1 182 aaPredicted RBP12.7□□□□□ -0.38
ZNF397-206ENST00000589420 ZNF654Q8IZM8 581 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 TMTC2Q8N394 836 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 SMARCC2Q8TAQ2 1214 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 PIBF1Q8WXW3 757 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 CUL5Q93034 780 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 ATP6V0A1Q93050 837 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 LY9Q9HBG7 655 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 SEC63Q9UGP8 760 aaKnown RBP12.7□□□□□ -0.38
ZNF397-206ENST00000589420 COG5Q9UP83 839 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 TRANK1O15050 2925 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 MYH7BA7E2Y1 1941 aa12.7□□□□□ -0.38
ZNF397-206ENST00000589420 LCHNA4D1U4 455 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 LPXNO60711 386 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 CAND2O75155 1236 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 SMIM10L2AP0DMW4 78 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 SMIM10L2BP0DMW5 78 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 GNAT1P11488 350 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 BMP1P13497 986 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 MCM5P33992 734 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 TFF2Q03403 129 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 TCTN1Q2MV58 587 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 PCNX4Q63HM2 1172 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 CYFIP1Q7L576 1253 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 TMEM87BQ96K49 555 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 SENP7Q9BQF6 1050 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 LMCD1Q9NZU5 365 aa12.69□□□□□ -0.38
ZNF397-206ENST00000589420 ZNF215Q9UL58 517 aaPredicted RBP12.69□□□□□ -0.38
ZNF397-206ENST00000589420 PRC1O43663 620 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 AMHP03971 560 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 ERVK-21P61565 698 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 SEMA3FQ13275 785 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 PLEKHG4Q58EX7 1191 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 KRT40Q6A162 431 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 USP17L6PQ6QN14 398 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 GIMAP8Q8ND71 665 aaPredicted RBP12.68□□□□□ -0.38
ZNF397-206ENST00000589420 DBF4BQ8NFT6 615 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 TGS1Q96RS0 853 aaKnown RBP12.68□□□□□ -0.38
ZNF397-206ENST00000589420 GPR20Q99678 358 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 MYL10Q9BUA6 226 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 RNPEPQ9H4A4 650 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 RTEL1Q9NZ71 1219 aa12.68□□□□□ -0.38
ZNF397-206ENST00000589420 XIRP2A4UGR9 3374 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 PTPRSQ13332 1948 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 LINC01553A4QN01 128 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 CCDC69A6NI79 296 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 SH2B2O14492 632 aaPredicted RBP12.67□□□□□ -0.38
ZNF397-206ENST00000589420 MEIS2O14770 477 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 TREHO43280 583 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 CALM1P0DP23 149 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 CALM2P0DP24 149 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 CALM3P0DP25 149 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 LIFRP42702 1097 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 IRX6P78412 446 aaPredicted RBP12.67□□□□□ -0.38
ZNF397-206ENST00000589420 SPRED2Q7Z698 418 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 SEPT8Q92599 483 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 HLA-CQ95604 372 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 CDHR1Q96JP9 859 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 LSG1Q9H089 658 aaKnown RBP12.67□□□□□ -0.38
ZNF397-206ENST00000589420 SUGCTQ9HAC7 445 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 INSL6Q9Y581 213 aa12.67□□□□□ -0.38
ZNF397-206ENST00000589420 PLEKHA8P1O95397 391 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 KCNQ1P51787 676 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 FAM117BQ6P1L5 589 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.66□□□□□ -0.38
ZNF397-206ENST00000589420 TRIM50Q86XT4 487 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 MYOCDQ8IZQ8 938 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 SRBD1Q8N5C6 995 aaKnown RBP12.66□□□□□ -0.38
ZNF397-206ENST00000589420 GDPD5Q8WTR4 605 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 GPRASP2Q96D09 838 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 PSTPIP2Q9H939 334 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 SETD4Q9NVD3 440 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 MTUS1Q9ULD2 1270 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 SLC12A7Q9Y666 1083 aa12.66□□□□□ -0.38
ZNF397-206ENST00000589420 SLC27A2O14975 620 aa12.65□□□□□ -0.38
ZNF397-206ENST00000589420 CTSHP09668 335 aa12.65□□□□□ -0.38
ZNF397-206ENST00000589420 HTRA4P83105 476 aaPredicted RBP12.65□□□□□ -0.38
ZNF397-206ENST00000589420 SP4Q02446 784 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms