RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 XRRA1Q6P2D8 792 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 VWCEQ96DN2 955 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 KIF2CQ99661 725 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 C16orf70Q9BSU1 422 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 HIPK3Q9H422 1215 aa11.3□□□□□ -0.6
PTPN2-208ENST00000589216 CHD9Q3L8U1 2897 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 KPNA6O60684 536 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 PFKFB2O60825 505 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 SLC34A2O95436 690 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 LGALS2P05162 132 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 PSEN2P49810 448 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 CCL23P55773 120 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 ARHGAP4P98171 946 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 AP3B2Q13367 1082 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 MTMR1Q13613 665 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 MFSD10Q14728 455 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 ME3Q16798 604 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 KIAA0753Q2KHM9 967 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 GDF6Q6KF10 455 aaPredicted RBP11.29□□□□□ -0.6
PTPN2-208ENST00000589216 MFSD5Q6N075 450 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 NFRKBQ6P4R8 1299 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 KCNV1Q6PIU1 500 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 METTL7BQ6UX53 244 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 C16orf59Q7L2K0 433 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 REXO1Q8N1G1 1221 aaKnown RBP11.29□□□□□ -0.6
PTPN2-208ENST00000589216 NECAB1Q8N987 351 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
PTPN2-208ENST00000589216 WNT8BQ93098 351 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 GPRASP2Q96D09 838 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 SCLYQ96I15 445 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 GPR20Q99678 358 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 MLXIPQ9HAP2 919 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 HDAC6Q9UBN7 1215 aa11.29□□□□□ -0.6
PTPN2-208ENST00000589216 IGLV3-22A0A075B6J6 115 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 FAM86B1E9PN63 330 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 CPLX1O14810 134 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 EDIL3O43854 480 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 FAM86B2P0C5J1 330 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 ARP10275 920 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 ZNF200P98182 395 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-208ENST00000589216 AKAP17AQ02040 695 aaKnown RBP11.28□□□□□ -0.6
PTPN2-208ENST00000589216 ITGB3BPQ13352 177 aaPredicted RBP11.28□□□□□ -0.6
PTPN2-208ENST00000589216 NLRX1Q86UT6 975 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 UIMC1Q96RL1 719 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.28□□□□□ -0.6
PTPN2-208ENST00000589216 MXRA8Q9BRK3 442 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 JADE2Q9NQC1 790 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 KCNH7Q9NS40 1196 aa11.28□□□□□ -0.6
PTPN2-208ENST00000589216 NOP56O00567 594 aaKnown RBP11.27□□□□□ -0.61
PTPN2-208ENST00000589216 ABCB7O75027 752 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 DEXIO95424 95 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 FOSP01100 380 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-208ENST00000589216 ACRP10323 421 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 NEK4P51957 841 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 SSRP1Q08945 709 aaKnown RBP11.27□□□□□ -0.61
PTPN2-208ENST00000589216 NEDD9Q14511 834 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 LRIT3Q3SXY7 679 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 CEP55Q53EZ4 464 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 FAM109BQ6ICB4 259 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-208ENST00000589216 TRIM22Q8IYM9 498 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 CCDC148Q8NFR7 591 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 GTF3C6Q969F1 213 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 SENP7Q9BQF6 1050 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 SLKQ9H2G2 1235 aaPredicted RBP11.27□□□□□ -0.61
PTPN2-208ENST00000589216 EHMT1Q9H9B1 1298 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 C6orf50Q9HD87 102 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 GTF2IRD1Q9UHL9 959 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 STK36Q9NRP7 1315 aa11.27□□□□□ -0.61
PTPN2-208ENST00000589216 GSTTP1A0A1W2PQM5 241 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 H3BRB1 525 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 M0R2N6 131 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 MEIS1O00470 390 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 JAK2O60674 1132 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 PPFIA4O75335 1185 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 FDPSP14324 419 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 HOXC8P31273 242 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 TCF7P36402 384 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 PTPN11Q06124 597 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 PTGISQ16647 500 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 TRIM71Q2Q1W2 868 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 TMEM240Q5SV17 173 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 UTP14CQ5TAP6 766 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 TEX2Q8IWB9 1127 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 NSUN7Q8NE18 718 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 CCDC12Q8WUD4 166 aaPredicted RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 LENG9Q96B70 501 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 RNPC3Q96LT9 517 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 PCYT2Q99447 389 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 KATNAL1Q9BW62 490 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 SEZ6LQ9BYH1 1024 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 AGO4Q9HCK5 861 aaKnown RBP11.26□□□□□ -0.61
PTPN2-208ENST00000589216 KCNJ14Q9UNX9 436 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 KAT6AQ92794 2004 aa11.26□□□□□ -0.61
PTPN2-208ENST00000589216 DDX39AO00148 427 aaKnown RBP11.25□□□□□ -0.61
PTPN2-208ENST00000589216 CCNE2O96020 404 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 CYP3A4P08684 503 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms