RNA–Protein interactions for RNA: ENST00000588915.1

VMP1-209, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 231 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-209ENST00000588915 SLC35G1Q2M3R5 365 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 XRRA1Q6P2D8 792 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.18
VMP1-209ENST00000588915 FCHSD1Q86WN1 690 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 SEPT8Q92599 483 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 TOP1MTQ969P6 601 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 MAP3K14Q99558 947 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 SENP7Q9BQF6 1050 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 IL25Q9H293 177 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 UBE2ZQ9H832 354 aaPredicted RBP16.18■□□□□ 0.18
VMP1-209ENST00000588915 MTUS1Q9ULD2 1270 aa16.18■□□□□ 0.18
VMP1-209ENST00000588915 FIBPO43427 364 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 GPR37L1O60883 481 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 CYP21A2P08686 494 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 SMIM10L2AP0DMW4 78 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 SMIM10L2BP0DMW5 78 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 SMARCA1P28370 1054 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 MRPS9P82933 396 aaKnown RBP16.17■□□□□ 0.18
VMP1-209ENST00000588915 WTAPQ15007 396 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 LEXMQ3ZCV2 418 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 RALYLQ86SE5 291 aaKnown RBP16.17■□□□□ 0.18
VMP1-209ENST00000588915 MYOCDQ8IZQ8 938 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 FBXO22Q8NEZ5 403 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 NCOA7Q8NI08 942 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 APBB2Q92870 758 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 FAM122AQ96E09 287 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 LRFN3Q9BTN0 628 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 EPHX3Q9H6B9 360 aa16.17■□□□□ 0.18
VMP1-209ENST00000588915 BRWD1Q9NSI6 2320 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 COL4A4P53420 1690 aaPredicted RBP16.16■□□□□ 0.18
VMP1-209ENST00000588915 TREHO43280 583 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 PTPROQ16827 1216 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 PUS10Q3MIT2 529 aaKnown RBP16.16■□□□□ 0.18
VMP1-209ENST00000588915 TMEM31Q5JXX7 168 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 TTC22Q5TAA0 569 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 FAM117BQ6P1L5 589 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 CATIPQ7Z7H3 387 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 GIMAP8Q8ND71 665 aaPredicted RBP16.16■□□□□ 0.18
VMP1-209ENST00000588915 EXOC6Q8TAG9 804 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 GPKOWQ92917 476 aaPredicted RBP eCLIP16.16■□□□□ 0.18
VMP1-209ENST00000588915 MRPL38Q96DV4 380 aaKnown RBP16.16■□□□□ 0.18
VMP1-209ENST00000588915 MTA3Q9BTC8 594 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 RAPGEFL1Q9UHV5 662 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 ZNF215Q9UL58 517 aaPredicted RBP16.16■□□□□ 0.18
VMP1-209ENST00000588915 SIP14410 1827 aa16.16■□□□□ 0.18
VMP1-209ENST00000588915 PIK3CDO00329 1044 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 SORBS3O60504 671 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 ADAM17P78536 824 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 FAM26DQ5JW98 314 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 PCNX4Q63HM2 1172 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 CYFIP1Q7L576 1253 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 RPAINQ86UA6 219 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 GPR20Q99678 358 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 LZTS2Q9BRK4 669 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 C17orf80Q9BSJ5 609 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 SPZ1Q9BXG8 430 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 NRCAMQ92823 1304 aa16.15■□□□□ 0.18
VMP1-209ENST00000588915 BAZ2BQ9UIF8 2168 aaKnown RBP16.14■□□□□ 0.17
VMP1-209ENST00000588915 MICAL3Q7RTP6 2002 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 E7EWF7 191 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 PI4K2BG5E9Z4 385 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 H3BNC9 293 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 GSPT1P15170 499 aaKnown RBP16.14■□□□□ 0.17
VMP1-209ENST00000588915 CHMLP26374 656 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 EPC2Q52LR7 807 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 TIGD5Q53EQ6 642 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 IGDCC4Q8TDY8 1250 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 CUL5Q93034 780 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 ZFP91Q96JP5 570 aaPredicted RBP16.14■□□□□ 0.17
VMP1-209ENST00000588915 YME1L1Q96TA2 773 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 BCAS3Q9H6U6 928 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 SETD4Q9NVD3 440 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 COL4A6Q14031 1691 aa16.14■□□□□ 0.17
VMP1-209ENST00000588915 KIF5BP33176 963 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 PTH1RQ03431 593 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 SEMA3FQ13275 785 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 NLRX1Q86UT6 975 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 FAM178BQ8IXR5 827 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 TMTC2Q8N394 836 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.13■□□□□ 0.17
VMP1-209ENST00000588915 SMARCC2Q8TAQ2 1214 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 RRP36Q96EU6 259 aaKnown RBP16.13■□□□□ 0.17
VMP1-209ENST00000588915 CDHR1Q96JP9 859 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 SENP2Q9HC62 589 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 RTEL1Q9NZ71 1219 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 HCN4Q9Y3Q4 1203 aa16.13■□□□□ 0.17
VMP1-209ENST00000588915 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.12■□□□□ 0.17
VMP1-209ENST00000588915 MEIS2O14770 477 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 MAFGO15525 162 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 SGSM2O43147 1006 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 DDAH1O94760 285 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 KCNA5P22460 613 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 PDE4AP27815 886 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 GNAQP50148 359 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 GPM6BQ13491 265 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 TAF2Q6P1X5 1199 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 TMEM192Q8IY95 271 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 CTCFLQ8NI51 663 aaPredicted RBP16.12■□□□□ 0.17
VMP1-209ENST00000588915 NEK9Q8TD19 979 aa16.12■□□□□ 0.17
VMP1-209ENST00000588915 MAP4K1Q92918 833 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms