RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 CALM2P0DP24 149 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 CALM3P0DP25 149 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 KCNJ6P48051 423 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 DEFB103AP81534 67 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 TAP1Q03518 808 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 UBE2SQ16763 222 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 UTP14CQ5TAP6 766 aaKnown RBP16.51■□□□□ 0.23
VMP1-206ENST00000587945 PCNX4Q63HM2 1172 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 CNKSR3Q6P9H4 555 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 TMTC3Q6ZXV5 915 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 SPRED2Q7Z698 418 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 TRIM50Q86XT4 487 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 FANCBQ8NB91 859 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 GPR20Q99678 358 aa16.51■□□□□ 0.23
VMP1-206ENST00000587945 SCN5AQ14524 2016 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 LCHNA4D1U4 455 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 KIF28PB7ZC32 967 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 TREHO43280 583 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 TLL1O43897 1013 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 PARNO95453 639 aaKnown RBP16.5■□□□□ 0.23
VMP1-206ENST00000587945 THPOP40225 353 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 HEATR3Q7Z4Q2 680 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 SERINC5Q86VE9 423 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 SGMS1Q86VZ5 419 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 RASEFQ8IZ41 740 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 ARNTL2Q8WYA1 636 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 ATP6V0A1Q93050 837 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 RNPEPQ9H4A4 650 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
VMP1-206ENST00000587945 SPTBN5Q9NRC6 3674 aaKnown RBP16.5■□□□□ 0.23
VMP1-206ENST00000587945 MYH6P13533 1939 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 ATP9AO75110 1047 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 ADCK5Q3MIX3 580 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 RNF20Q5VTR2 975 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 KRT40Q6A162 431 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 XRRA1Q6P2D8 792 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 NLRX1Q86UT6 975 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 USP26Q9BXU7 913 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 SETD4Q9NVD3 440 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 KIAA1217Q5T5P2 1943 aa16.49■□□□□ 0.23
VMP1-206ENST00000587945 RSPH10B2B2RC85 870 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 RSPH10BP0C881 870 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 ITGB5P18084 799 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 HOXC8P31273 242 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 EXOSC10Q01780 885 aaKnown RBP16.48■□□□□ 0.23
VMP1-206ENST00000587945 TJAP1Q5JTD0 557 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 FAM117BQ6P1L5 589 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 APOA5Q6Q788 366 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 SYNE3Q6ZMZ3 975 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 SENP7Q9BQF6 1050 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 ZBED2Q9BTP6 218 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 OSBPL7Q9BZF2 842 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 PKD2L1Q9P0L9 805 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 THEGQ9P2T0 379 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 BRPF3Q9ULD4 1205 aa16.48■□□□□ 0.23
VMP1-206ENST00000587945 ABHD14A-ACY1A0A1B0GW23 586 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 LGR5O75473 907 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 CTSHP09668 335 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 KCNA2P16389 499 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 IKBKEQ14164 716 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 WWC2Q6AWC2 1192 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.47■□□□□ 0.233e-6■■■■□ 19.8
VMP1-206ENST00000587945 DHX32Q7L7V1 743 aaKnown RBP16.47■□□□□ 0.23
VMP1-206ENST00000587945 DBF4BQ8NFT6 615 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 TET1Q8NFU7 2136 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 PCDHA6Q9UN73 950 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 PCDHA8Q9Y5H6 950 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 MTCH2Q9Y6C9 303 aa16.47■□□□□ 0.23
VMP1-206ENST00000587945 CNTNAP5Q8WYK1 1306 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 CDC45O75419 566 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 FUT2Q10981 343 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 RTN1Q16799 776 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 TYW1BQ6NUM6 668 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 ATXN2LQ8WWM7 1075 aaKnown RBP16.46■□□□□ 0.23
VMP1-206ENST00000587945 SYMPKQ92797 1274 aaKnown RBP16.46■□□□□ 0.23
VMP1-206ENST00000587945 GPRASP2Q96D09 838 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 PGBD1Q96JS3 809 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 ZNF215Q9UL58 517 aaPredicted RBP16.46■□□□□ 0.23
VMP1-206ENST00000587945 UBIAD1Q9Y5Z9 338 aa16.46■□□□□ 0.23
VMP1-206ENST00000587945 MYO9BQ13459 2157 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 ZBTB43O43298 467 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 GTPBP6O43824 516 aaPredicted RBP16.45■□□□□ 0.22
VMP1-206ENST00000587945 GJB5O95377 273 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 CPA1P15085 419 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 TCF7P36402 384 aaPredicted RBP16.45■□□□□ 0.22
VMP1-206ENST00000587945 ARHGAP4P98171 946 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 LMBR1Q8WVP7 490 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 ASB2Q96Q27 587 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 RBM28Q9NW13 759 aaKnown RBP16.45■□□□□ 0.22
VMP1-206ENST00000587945 MTUS1Q9ULD2 1270 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
VMP1-206ENST00000587945 TANC1Q9C0D5 1861 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 EMSYQ7Z589 1322 aa16.45■□□□□ 0.22
VMP1-206ENST00000587945 KLF18A0A0U1RQI7 1052 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 GSTTP1A0A1W2PQM5 241 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 EFCAB14O75071 495 aa16.44■□□□□ 0.22
VMP1-206ENST00000587945 GNAT1P11488 350 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms