RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 CTCFLQ8NI51 663 aaPredicted RBP16.17■□□□□ 0.18
ATG4D-206ENST00000586863 MAP3K14Q99558 947 aa16.17■□□□□ 0.18
ATG4D-206ENST00000586863 TUT1Q9H6E5 874 aaKnown RBP16.17■□□□□ 0.18
ATG4D-206ENST00000586863 RTEL1Q9NZ71 1219 aa16.17■□□□□ 0.18
ATG4D-206ENST00000586863 ABHD14A-ACY1A0A1B0GW23 586 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 SPATA31C2B4DYI2 1134 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 NOP56O00567 594 aaKnown RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 SH2B2O14492 632 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 PRC1O43663 620 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 LGR5O75473 907 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 GJB5O95377 273 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 SMIM10L2AP0DMW4 78 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 SMIM10L2BP0DMW5 78 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 RXRAP19793 462 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 THPOP40225 353 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 CASC1Q6TDU7 716 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 METTL7BQ6UX53 244 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 CYFIP1Q7L576 1253 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 TRIM50Q86XT4 487 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 ATP6V0A1Q93050 837 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 RRP36Q96EU6 259 aaKnown RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 UHRF1Q96T88 793 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 ZBED2Q9BTP6 218 aa16.16■□□□□ 0.18
ATG4D-206ENST00000586863 LSG1Q9H089 658 aaKnown RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 TSPYL2Q9H2G4 693 aaPredicted RBP16.16■□□□□ 0.18
ATG4D-206ENST00000586863 C17orf102A2RUQ5 167 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 MEIS2O14770 477 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 TREHO43280 583 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 FIBPO43427 364 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 STAM2O75886 525 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 KIF5BP33176 963 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-206ENST00000586863 IKBKEQ14164 716 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 NEDD9Q14511 834 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 FAM117BQ6P1L5 589 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 CMTR1Q8N1G2 835 aaKnown RBP16.15■□□□□ 0.18
ATG4D-206ENST00000586863 SRBD1Q8N5C6 995 aaKnown RBP16.15■□□□□ 0.18
ATG4D-206ENST00000586863 IL27Q8NEV9 243 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 SMARCC2Q8TAQ2 1214 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 GDPD5Q8WTR4 605 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 NECAB3Q96P71 396 aaPredicted RBP16.15■□□□□ 0.18
ATG4D-206ENST00000586863 GPR20Q99678 358 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 EMSYQ7Z589 1322 aa16.15■□□□□ 0.18
ATG4D-206ENST00000586863 RSPH10B2B2RC85 870 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 PIK3CDO00329 1044 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 SLC27A2O14975 620 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 EFCAB14O75071 495 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 RSPH10BP0C881 870 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 SMARCA1P28370 1054 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 MCM5P33992 734 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 KCNQ1P51787 676 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 PCNX4Q63HM2 1172 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.14■□□□□ 0.17
ATG4D-206ENST00000586863 RAB11FIP4Q86YS3 637 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 DBF4BQ8NFT6 615 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 CUL5Q93034 780 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 RAD9AQ99638 391 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 MTA3Q9BTC8 594 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 OSBPL7Q9BZF2 842 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 RNPEPQ9H4A4 650 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 SEC63Q9UGP8 760 aaKnown RBP16.14■□□□□ 0.17
ATG4D-206ENST00000586863 MTUS1Q9ULD2 1270 aa16.14■□□□□ 0.17
ATG4D-206ENST00000586863 LINC01553A4QN01 128 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 CTSHP09668 335 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 BMP1P13497 986 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 SP4Q02446 784 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 NFXL1Q6ZNB6 911 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 TMEM87BQ96K49 555 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 LZTS2Q9BRK4 669 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 ESYT1Q9BSJ8 1104 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 USP26Q9BXU7 913 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 LRRC2Q9BYS8 371 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 SETD4Q9NVD3 440 aa16.13■□□□□ 0.17
ATG4D-206ENST00000586863 hCG_1642624A0A1W2PR95 340 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 CCDC69A6NI79 296 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 GNAQP50148 359 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 ERVK-21P61565 698 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 PLEKHG4Q58EX7 1191 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 UTP14CQ5TAP6 766 aaKnown RBP16.12■□□□□ 0.17
ATG4D-206ENST00000586863 CREB3L3Q68CJ9 461 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 TGS1Q96RS0 853 aaKnown RBP16.12■□□□□ 0.17
ATG4D-206ENST00000586863 SENP7Q9BQF6 1050 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 SUGCTQ9HAC7 445 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 NLRC5Q86WI3 1866 aa16.12■□□□□ 0.17
ATG4D-206ENST00000586863 LIFRP42702 1097 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 NECTIN1Q15223 517 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 UBE2SQ16763 222 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 AAK1Q2M2I8 961 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 XRRA1Q6P2D8 792 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 SKAP1Q86WV1 359 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 MYOCDQ8IZQ8 938 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 LMBR1Q8WVP7 490 aa16.11■□□□□ 0.17
ATG4D-206ENST00000586863 ZNF215Q9UL58 517 aaPredicted RBP16.11■□□□□ 0.17
ATG4D-206ENST00000586863 ATP9AO75110 1047 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 CAND2O75155 1236 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 AMHP03971 560 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 KCNA2P16389 499 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 ITGB5P18084 799 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 ADAM17P78536 824 aa16.1■□□□□ 0.17
ATG4D-206ENST00000586863 ARHGAP4P98171 946 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms