RNA–Protein interactions for RNA: ENST00000586122.5

SMARCA4-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 512 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-209ENST00000586122 TRPV6Q9H1D0 765 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 MTIF3Q9H2K0 278 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 NCOA5Q9HCD5 579 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 TRMT13Q9NUP7 481 aaKnown RBP11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 GTF2IRD1Q9UHL9 959 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 TANC1Q9C0D5 1861 aa11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 TRIP12Q14669 1992 aaPredicted RBP11.88□□□□□ -0.51
SMARCA4-209ENST00000586122 NFASCO94856 1347 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 H3BRB1 525 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 PARNO95453 639 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 LGALS2P05162 132 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 CYP3A4P08684 503 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 ZNF286BP0CG31 522 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 KCNA2P16389 499 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 XBP1P17861 261 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 RFC2P35250 354 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 AK2P54819 239 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 ARHGAP4P98171 946 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 SETQ01105 290 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 PTGISQ16647 500 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 CYFIP1Q7L576 1253 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 RPUSD2Q8IZ73 545 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 RETREG2Q8NC44 543 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 WASF1Q92558 559 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 ZFP91Q96JP5 570 aaPredicted RBP11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 GPR20Q99678 358 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 SDF4Q9BRK5 362 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 C16orf70Q9BSU1 422 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 TUT1Q9H6E5 874 aaKnown RBP11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 KCNH7Q9NS40 1196 aa11.87□□□□□ -0.51
SMARCA4-209ENST00000586122 MEIS1O00470 390 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 GNAT1P11488 350 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 CYP2C18P33260 490 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 ZNF76P36508 570 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 NEK4P51957 841 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 NLRP5P59047 1200 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 RBL2Q08999 1139 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 STK3Q13188 491 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 SHHQ15465 462 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 C8orf34Q49A92 452 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 JAKMIP3Q5VZ66 844 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 DAGLBQ8NCG7 672 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 AFAP1L1Q8TED9 768 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 CRYGNQ8WXF5 182 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 TNPO1Q92973 898 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 RNPC3Q96LT9 517 aaKnown RBP11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 ALG1Q9BT22 464 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 JPH1Q9HDC5 661 aaPredicted RBP11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 IL23AQ9NPF7 189 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 TPCN1Q9ULQ1 816 aa11.86□□□□□ -0.51
SMARCA4-209ENST00000586122 CYP2C9P11712 490 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 CSF2RAP15509 400 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 CIITAP33076 1130 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 CHMP4BP1P59074 171 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 SCRN1Q12765 414 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 PTK7Q13308 1070 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 C9orf50Q5SZB4 431 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 GDF6Q6KF10 455 aaPredicted RBP11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 WNT8AQ9H1J5 351 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 TMEM260Q9NX78 707 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 VPS54Q9P1Q0 977 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 HDAC6Q9UBN7 1215 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 SLC9A2Q9UBY0 812 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 PCDHA4Q9UN74 947 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 MYH9P35579 1960 aaKnown RBP11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 EMSYQ7Z589 1322 aa11.85□□□□□ -0.51
SMARCA4-209ENST00000586122 ATP9AO75110 1047 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 CAND2O75155 1236 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 SEC24BO95487 1268 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 RPLP2P05387 115 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 HOXC8P31273 242 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 TCF7P36402 384 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 USP11P51784 963 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 EPHB4P54760 987 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 SMAD3P84022 425 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 FAM109BQ6ICB4 259 aaPredicted RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 PLA2G4DQ86XP0 818 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 GTF3C6Q969F1 213 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 PGBD1Q96JS3 809 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 LARP6Q9BRS8 491 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 SMARCAD1Q9H4L7 1026 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 UPF2Q9HAU5 1272 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 AGO4Q9HCK5 861 aaKnown RBP11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 ERAP1Q9NZ08 941 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 TCEAL9Q9UHQ7 104 aa11.84□□□□□ -0.51
SMARCA4-209ENST00000586122 SCN5AQ14524 2016 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 IGLV3-22A0A075B6J6 115 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 C17orf102A2RUQ5 167 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SORBS3O60504 671 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 LGR5O75473 907 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 FGBP02675 491 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 IQCF3P0C7M6 154 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SMIM10L2AP0DMW4 78 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SMIM10L2BP0DMW5 78 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 ACTN1P12814 892 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SELPP16109 830 aa11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 RBM25P49756 843 aaKnown RBP11.83□□□□□ -0.52
SMARCA4-209ENST00000586122 SLC26A2P50443 739 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms