RNA–Protein interactions for RNA: ENST00000585096.1

SRSF1-209, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 4 BASIC

Gene SRSF1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-209ENST00000585096 PBX4Q9BYU1 374 aa20.49■□□□□ 0.87
SRSF1-209ENST00000585096 FTOQ9C0B1 505 aaKnown RBP eCLIP20.49■□□□□ 0.87
SRSF1-209ENST00000585096 TUT1Q9H6E5 874 aaKnown RBP20.49■□□□□ 0.87
SRSF1-209ENST00000585096 BCAS3Q9H6U6 928 aa20.49■□□□□ 0.87
SRSF1-209ENST00000585096 BARHL2Q9NY43 387 aa20.49■□□□□ 0.87
SRSF1-209ENST00000585096 MSRAQ9UJ68 235 aa20.49■□□□□ 0.87
SRSF1-209ENST00000585096 MAFGO15525 162 aa20.48■□□□□ 0.87
SRSF1-209ENST00000585096 PARNO95453 639 aaKnown RBP20.48■□□□□ 0.87
SRSF1-209ENST00000585096 FOSP01100 380 aaPredicted RBP20.48■□□□□ 0.87
SRSF1-209ENST00000585096 LGALS2P05162 132 aa20.48■□□□□ 0.87
SRSF1-209ENST00000585096 SELPP16109 830 aa20.48■□□□□ 0.87
SRSF1-209ENST00000585096 ADD1P35611 737 aaKnown RBP20.48■□□□□ 0.87
SRSF1-209ENST00000585096 VWCEQ96DN2 955 aa20.48■□□□□ 0.87
SRSF1-209ENST00000585096 UBIAD1Q9Y5Z9 338 aa20.48■□□□□ 0.87
SRSF1-209ENST00000585096 KIAA1217Q5T5P2 1943 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 SMCO2A6NFE2 343 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 STXBP3O00186 592 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 ITGB5P18084 799 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 RBL2Q08999 1139 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 MTMR1Q13613 665 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 TYW1BQ6NUM6 668 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 LRRC8DQ7L1W4 858 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 SLC17A8Q8NDX2 589 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 AGXT2Q9BYV1 514 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 ZNF576Q9H609 170 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 JADE2Q9NQC1 790 aa20.47■□□□□ 0.87
SRSF1-209ENST00000585096 ZNF215Q9UL58 517 aaPredicted RBP20.47■□□□□ 0.87
SRSF1-209ENST00000585096 C17orf102A2RUQ5 167 aa20.46■□□□□ 0.87
SRSF1-209ENST00000585096 PBX2P40425 430 aa20.46■□□□□ 0.87
SRSF1-209ENST00000585096 SP4Q02446 784 aa20.46■□□□□ 0.87
SRSF1-209ENST00000585096 PFKFB3Q16875 520 aaPredicted RBP20.46■□□□□ 0.87
SRSF1-209ENST00000585096 DHX38Q92620 1227 aaKnown RBP20.46■□□□□ 0.87
SRSF1-209ENST00000585096 ATP9AO75110 1047 aa20.45■□□□□ 0.86
SRSF1-209ENST00000585096 CKBP12277 381 aa20.45■□□□□ 0.86
SRSF1-209ENST00000585096 KCNA2P16389 499 aa20.45■□□□□ 0.86
SRSF1-209ENST00000585096 ATP2A2P16615 1042 aaKnown RBP20.45■□□□□ 0.86
SRSF1-209ENST00000585096 AP3B2Q13367 1082 aa20.45■□□□□ 0.86
SRSF1-209ENST00000585096 UTP14CQ5TAP6 766 aaKnown RBP20.45■□□□□ 0.86
SRSF1-209ENST00000585096 RUFY3Q7L099 469 aa20.45■□□□□ 0.86
SRSF1-209ENST00000585096 SMIM10L2AP0DMW4 78 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 SMIM10L2BP0DMW5 78 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 GNAT1P11488 350 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 SCG2P13521 617 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 ZNF200P98182 395 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-209ENST00000585096 AKAP17AQ02040 695 aaKnown RBP20.44■□□□□ 0.86
SRSF1-209ENST00000585096 CCDC12Q8WUD4 166 aaPredicted RBP20.44■□□□□ 0.86
SRSF1-209ENST00000585096 MYLIPQ8WY64 445 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 ATP6V0A1Q93050 837 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 MXRA8Q9BRK3 442 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 ZSWIM6Q9HCJ5 1215 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 CYP46A1Q9Y6A2 500 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 NID2Q14112 1375 aa20.44■□□□□ 0.86
SRSF1-209ENST00000585096 PRPF3O43395 683 aaKnown RBP20.43■□□□□ 0.86
SRSF1-209ENST00000585096 BAIAP3O94812 1187 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 CENPBP07199 599 aaPredicted RBP20.43■□□□□ 0.86
SRSF1-209ENST00000585096 FOSL2P15408 326 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 EVCP57679 992 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 GRIN2CQ14957 1233 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 SERINC5Q86VE9 423 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 PHOSPHO2Q8TCD6 241 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 SEPT1Q8WYJ6 367 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 SLC9A7Q96T83 725 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 ANO3Q9BYT9 981 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 RNPEPQ9H4A4 650 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 SLC28A3Q9HAS3 691 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 PKD2L1Q9P0L9 805 aa20.43■□□□□ 0.86
SRSF1-209ENST00000585096 LAMA2P24043 3122 aaKnown RBP20.43■□□□□ 0.86
SRSF1-209ENST00000585096 PDIA3P30101 505 aaKnown RBP20.42■□□□□ 0.86
SRSF1-209ENST00000585096 HOXC8P31273 242 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 TCF7P36402 384 aaPredicted RBP20.42■□□□□ 0.86
SRSF1-209ENST00000585096 HIC1Q14526 733 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 TRIM71Q2Q1W2 868 aaKnown RBP20.42■□□□□ 0.86
SRSF1-209ENST00000585096 MCTP2Q6DN12 878 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 TRIM50Q86XT4 487 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 PGBD1Q96JS3 809 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 TM6SF1Q9BZW5 370 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 C6orf50Q9HD87 102 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 KCNH7Q9NS40 1196 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 PCDHA11Q9Y5I1 949 aa20.42■□□□□ 0.86
SRSF1-209ENST00000585096 ESYT2A0FGR8 921 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 CXCL10P02778 98 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 SREBF1P36956 1147 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 THPOP40225 353 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 CLK2P49760 499 aaKnown RBP20.41■□□□□ 0.86
SRSF1-209ENST00000585096 CEP55Q53EZ4 464 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 ZNF618Q5T7W0 954 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 CNKSR3Q6P9H4 555 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 RNF26Q9BY78 433 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-209ENST00000585096 NKX2-4Q9H2Z4 354 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 JPH1Q9HDC5 661 aaPredicted RBP20.41■□□□□ 0.86
SRSF1-209ENST00000585096 SETD4Q9NVD3 440 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 TMEM260Q9NX78 707 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 TELO2Q9Y4R8 837 aa20.41■□□□□ 0.86
SRSF1-209ENST00000585096 TREHO43280 583 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 IFNAR1P17181 557 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 GNA11P29992 359 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 ZNF76P36508 570 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 KCNJ6P48051 423 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 RABGGTBP53611 331 aa20.4■□□□□ 0.86
SRSF1-209ENST00000585096 GPNMBQ14956 572 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms