RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 PPFIA4O75335 1185 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 EIF3JO75822 258 aaKnown RBP21.16■□□□□ 0.98
TOP3A-220ENST00000585031 CTSHP09668 335 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 ARHGEF16Q5VV41 709 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 ADGRF4Q8IZF3 695 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 ZFP91Q96JP5 570 aaPredicted RBP21.16■□□□□ 0.98
TOP3A-220ENST00000585031 FAM227BQ96M60 508 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 TTC14Q96N46 770 aa21.16■□□□□ 0.98
TOP3A-220ENST00000585031 SALL3Q9BXA9 1300 aa21.15■□□□□ 0.98
TOP3A-220ENST00000585031 GFRA3O60609 400 aa21.15■□□□□ 0.98
TOP3A-220ENST00000585031 QRICH1Q2TAL8 776 aa21.15■□□□□ 0.98
TOP3A-220ENST00000585031 CELF3Q5SZQ8 465 aaKnown RBP21.15■□□□□ 0.98
TOP3A-220ENST00000585031 TBC1D10CQ8IV04 446 aa21.15■□□□□ 0.98
TOP3A-220ENST00000585031 SEPT8Q92599 483 aa21.15■□□□□ 0.98
TOP3A-220ENST00000585031 KIAA1671Q9BY89 1806 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 A0A0D9SFI3 127 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 C5orf67F2Z3F1 127 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 SMAD4Q13485 552 aaKnown RBP21.14■□□□□ 0.97
TOP3A-220ENST00000585031 CAMK1Q14012 370 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 IL31RAQ8NI17 732 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 ATP6V0A1Q93050 837 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 SPATA33Q96N06 139 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 IFIH1Q9BYX4 1025 aaKnown RBP21.14■□□□□ 0.97
TOP3A-220ENST00000585031 RNPEPQ9H4A4 650 aa21.14■□□□□ 0.97
TOP3A-220ENST00000585031 CACNA1AO00555 2505 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 VPS13AQ96RL7 3174 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 STXBP3O00186 592 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 CSPG5O95196 566 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 GGPS1O95749 300 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 RB1P06400 928 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 SMIM10L2AP0DMW4 78 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 SMIM10L2BP0DMW5 78 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 CTNNB1P35222 781 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 GPATCH4Q5T3I0 446 aaKnown RBP21.13■□□□□ 0.97
TOP3A-220ENST00000585031 ZNF589Q86UQ0 364 aaPredicted RBP21.13■□□□□ 0.97
TOP3A-220ENST00000585031 FBXL6Q8N531 539 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 MAF1Q9H063 256 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 LMAN2LQ9H0V9 348 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 IGFLR1Q9H665 355 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 TELO2Q9Y4R8 837 aa21.13■□□□□ 0.97
TOP3A-220ENST00000585031 SUPT16HQ9Y5B9 1047 aaKnown RBP21.13■□□□□ 0.97
TOP3A-220ENST00000585031 NEDD4P46934 1319 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 C17orf102A2RUQ5 167 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 EYA4O95677 639 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 HSPD1P10809 573 aaKnown RBP21.12■□□□□ 0.97
TOP3A-220ENST00000585031 MYCLP12524 364 aaPredicted RBP21.12■□□□□ 0.97
TOP3A-220ENST00000585031 BMPR1AP36894 532 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 ZXDAP98168 799 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 IL17RAQ96F46 866 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 JMJD4Q9H9V9 463 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 RC3H2Q9HBD1 1191 aaKnown RBP21.12■□□□□ 0.97
TOP3A-220ENST00000585031 TTC3P53804 2025 aa21.12■□□□□ 0.97
TOP3A-220ENST00000585031 CFBP00751 764 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 MX1P20591 662 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 UBA1P22314 1058 aaKnown RBP21.11■□□□□ 0.97
TOP3A-220ENST00000585031 HSD17B4P51659 736 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 ADAM15Q13444 863 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 MCF2L2Q86YR7 1114 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 SUGP1Q8IWZ8 645 aaKnown RBP21.11■□□□□ 0.97
TOP3A-220ENST00000585031 FIBCD1Q8N539 461 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 MSLNLQ96KJ4 702 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 PDCD2LQ9BRP1 358 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 VAT1LQ9HCJ6 419 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 HELLSQ9NRZ9 838 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 CD207Q9UJ71 328 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 DCHS1Q96JQ0 3298 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 KAT6AQ92794 2004 aa21.11■□□□□ 0.97
TOP3A-220ENST00000585031 RIF1Q5UIP0 2472 aaKnown RBP21.1■□□□□ 0.97
TOP3A-220ENST00000585031 LOC730098B7Z3J9 87 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 H3BRB1 525 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 PPP1R11O60927 126 aaPredicted RBP21.1■□□□□ 0.97
TOP3A-220ENST00000585031 DNAJB1P25685 340 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 CBX2Q14781 532 aaPredicted RBP21.1■□□□□ 0.97
TOP3A-220ENST00000585031 VSIG10LQ86VR7 867 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 TUT1Q9H6E5 874 aaKnown RBP21.1■□□□□ 0.97
TOP3A-220ENST00000585031 SETD4Q9NVD3 440 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 FAM86C1Q9NVL1 165 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 MRPL11Q9Y3B7 192 aaKnown RBP21.1■□□□□ 0.97
TOP3A-220ENST00000585031 PCDHB15Q9Y5E8 787 aa21.1■□□□□ 0.97
TOP3A-220ENST00000585031 PLXNA3P51805 1871 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 BAZ2BQ9UIF8 2168 aaKnown RBP21.09■□□□□ 0.97
TOP3A-220ENST00000585031 MFSD6Q6ZSS7 791 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 STOX1Q6ZVD7 989 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 PNMA1Q8ND90 353 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 CLP1Q92989 425 aaKnown RBP21.09■□□□□ 0.97
TOP3A-220ENST00000585031 IRF2BPLQ9H1B7 796 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 CLEC1BQ9P126 229 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 RCAN3Q9UKA8 241 aa21.09■□□□□ 0.97
TOP3A-220ENST00000585031 CHRNA1P02708 482 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 LGALS2P05162 132 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 NEFLP07196 543 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 HOXA13P31271 388 aaPredicted RBP21.08■□□□□ 0.97
TOP3A-220ENST00000585031 ADAM17P78536 824 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 GHRHRQ02643 423 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 PGM5Q15124 567 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 ADGRD2Q7Z7M1 963 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 DGKHQ86XP1 1220 aa21.08■□□□□ 0.97
TOP3A-220ENST00000585031 C11orf84Q9BUA3 381 aaPredicted RBP21.08■□□□□ 0.97
TOP3A-220ENST00000585031 WDR87Q6ZQQ6 2873 aa21.08■□□□□ 0.96
TOP3A-220ENST00000585031 ZMYM6O95789 1325 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms