RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 SMIM10L2AP0DMW4 78 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 SMIM10L2BP0DMW5 78 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 ICAM3P32942 547 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 THPOP40225 353 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 DEFB103AP81534 67 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 SEMA3FQ13275 785 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 NECTIN1Q15223 517 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 UTP14CQ5TAP6 766 aaKnown RBP23.52■■□□□ 1.36
TOP3A-219ENST00000584887 METTL7BQ6UX53 244 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 ARNTL2Q8WYA1 636 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 ATP6V0A1Q93050 837 aa23.52■■□□□ 1.36
TOP3A-219ENST00000584887 MEIS2O14770 477 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 ARHGEF15O94989 841 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 CXCL10P02778 98 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 LIFRP42702 1097 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 TAP1Q03518 808 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 TCTN1Q2MV58 587 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 RNF20Q5VTR2 975 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 PCNX4Q63HM2 1172 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 NLRX1Q86UT6 975 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 TRIM50Q86XT4 487 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 PSTPIP2Q9H939 334 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 DOCK5Q9H7D0 1870 aa23.51■■□□□ 1.35
TOP3A-219ENST00000584887 PRRC2BQ5JSZ5 2229 aaKnown RBP23.5■■□□□ 1.35
TOP3A-219ENST00000584887 PIK3CDO00329 1044 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 GTPBP6O43824 516 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-219ENST00000584887 SKIV2LQ15477 1246 aaKnown RBP23.5■■□□□ 1.35
TOP3A-219ENST00000584887 UBE2SQ16763 222 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 BMP2KLQ5H9B9 411 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 SYNE3Q6ZMZ3 975 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 CENPQQ7L2Z9 268 aaPredicted RBP23.5■■□□□ 1.35
TOP3A-219ENST00000584887 HEATR3Q7Z4Q2 680 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 SERINC5Q86VE9 423 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 GPR20Q99678 358 aa23.5■■□□□ 1.35
TOP3A-219ENST00000584887 ABHD14A-ACY1A0A1B0GW23 586 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 EPOPA6NHQ4 379 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 IKBKEQ14164 716 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 MBTPS1Q14703 1052 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 FAM117BQ6P1L5 589 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 XRRA1Q6P2D8 792 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 TRAF7Q6Q0C0 670 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 TMTC3Q6ZXV5 915 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 FANCBQ8NB91 859 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 USP26Q9BXU7 913 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 ZNF215Q9UL58 517 aaPredicted RBP23.49■■□□□ 1.35
TOP3A-219ENST00000584887 TELO2Q9Y4R8 837 aa23.49■■□□□ 1.35
TOP3A-219ENST00000584887 RSPH10B2B2RC85 870 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 LGR5O75473 907 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 CTSHP09668 335 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 RSPH10BP0C881 870 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 IL27Q8NEV9 243 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 ATXN2LQ8WWM7 1075 aaKnown RBP23.48■■□□□ 1.35
TOP3A-219ENST00000584887 TCEANC2Q96MN5 208 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 TSPYL2Q9H2G4 693 aaPredicted RBP23.48■■□□□ 1.35
TOP3A-219ENST00000584887 PKD2L1Q9P0L9 805 aa23.48■■□□□ 1.35
TOP3A-219ENST00000584887 PTPRSQ13332 1948 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 CHD7Q9P2D1 2997 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 LCHNA4D1U4 455 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 SPDYE3A6NKU9 549 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 TREHO43280 583 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 SPRED2Q7Z698 418 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 NEK1Q96PY6 1258 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 RNPEPQ9H4A4 650 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 SETD4Q9NVD3 440 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 EMSYQ7Z589 1322 aa23.47■■□□□ 1.35
TOP3A-219ENST00000584887 EFCAB14O75071 495 aa23.46■■□□□ 1.35
TOP3A-219ENST00000584887 MRPS5P82675 430 aaKnown RBP23.46■■□□□ 1.35
TOP3A-219ENST00000584887 KRT40Q6A162 431 aa23.46■■□□□ 1.35
TOP3A-219ENST00000584887 SGMS1Q86VZ5 419 aa23.46■■□□□ 1.35
TOP3A-219ENST00000584887 ASB2Q96Q27 587 aa23.46■■□□□ 1.35
TOP3A-219ENST00000584887 SENP7Q9BQF6 1050 aa23.46■■□□□ 1.35
TOP3A-219ENST00000584887 GNAT1P11488 350 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 ARHGAP4P98171 946 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 APOA5Q6Q788 366 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 GIMAP8Q8ND71 665 aaPredicted RBP23.45■■□□□ 1.34
TOP3A-219ENST00000584887 DBF4BQ8NFT6 615 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 GPRASP2Q96D09 838 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 MTUS1Q9ULD2 1270 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 NAP1L2Q9ULW6 460 aaPredicted RBP23.45■■□□□ 1.34
TOP3A-219ENST00000584887 MTCH2Q9Y6C9 303 aa23.45■■□□□ 1.34
TOP3A-219ENST00000584887 CDC45O75419 566 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 GJB5O95377 273 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 HOXC8P31273 242 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 RTN1Q16799 776 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 MYOCDQ8IZQ8 938 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 CDHR1Q96JP9 859 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 PCDHA6Q9UN73 950 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 PCDHA8Q9Y5H6 950 aa23.44■■□□□ 1.34
TOP3A-219ENST00000584887 ATP9AO75110 1047 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 ITGB5P18084 799 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 TCF7P36402 384 aaPredicted RBP23.43■■□□□ 1.34
TOP3A-219ENST00000584887 NAPAP54920 295 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 GRB10Q13322 594 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 MTMR1Q13613 665 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.43■■□□□ 1.34
TOP3A-219ENST00000584887 LMBR1Q8WVP7 490 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 RAD9AQ99638 391 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 EHMT1Q9H9B1 1298 aa23.43■■□□□ 1.34
TOP3A-219ENST00000584887 RBM28Q9NW13 759 aaKnown RBP23.43■■□□□ 1.34
TOP3A-219ENST00000584887 CNTNAP5Q8WYK1 1306 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms