RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MKRN1Q9UHC7 482 aaKnown RBP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 NKRFO15226 690 aaKnown RBP eCLIP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 FGRP09769 529 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 NMT1P30419 496 aaKnown RBP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 GJC1P36383 396 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 DGKZQ13574 1117 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 ZC2HC1CQ53FD0 456 aaPredicted RBP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 TTI2Q6NXR4 508 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 NOA1Q8NC60 698 aaKnown RBP12.45□□□□□ -0.42
TOP3A-217ENST00000584582 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 DYDC2Q96IM9 177 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 IKZF4Q9H2S9 585 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 NUP98P52948 1817 aa12.45□□□□□ -0.42
TOP3A-217ENST00000584582 GOLGA8IPA6NC78 632 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 GOLGA8JA6NMD2 632 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 PPP1R11O60927 126 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-217ENST00000584582 STRIP1Q5VSL9 837 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 LEKR1Q6ZMV7 388 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 U2AF1L4Q8WU68 220 aaKnown RBP12.44□□□□□ -0.42
TOP3A-217ENST00000584582 EHMT1Q9H9B1 1298 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 ABCB6Q9NP58 842 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 DDX41Q9UJV9 622 aaKnown RBP12.44□□□□□ -0.42
TOP3A-217ENST00000584582 PRR12Q9ULL5 1215 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 CEP104O60308 925 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 MED24O75448 989 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 CRY2Q49AN0 593 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 IQCEQ6IPM2 695 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 SND1Q7KZF4 910 aaKnown RBP eCLIP12.44□□□□□ -0.42
TOP3A-217ENST00000584582 EEPD1Q7L9B9 569 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 C4orf32Q8N8J7 132 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 GBP3Q9H0R5 595 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 MRFAP1Q9Y605 127 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 KDM3AQ9Y4C1 1321 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 GUCY2FP51841 1108 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 MIER3Q7Z3K6 550 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 PHLDB2Q86SQ0 1253 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 SLFN12Q8IYM2 578 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 PNMA5Q96PV4 448 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 RIOX1Q9H6W3 641 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 FRMD4BQ9Y2L6 1034 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 LRP6O75581 1613 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 PKD1L3Q7Z443 1732 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 SLIT2O94813 1529 aa12.44□□□□□ -0.42
TOP3A-217ENST00000584582 KRT13P13646 458 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 CAPN2P17655 700 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 RPL13P26373 211 aaKnown RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 EXOC3L4Q17RC7 722 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 ODF2Q5BJF6 829 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 DUSP9Q99956 384 aaKnown RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 TRIM49P0CI25 452 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 TRIM49CP0CI26 452 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 MYBP10242 640 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 PRPHP41219 470 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 ECM1Q16610 540 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 TTC19Q6DKK2 380 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 NFRKBQ6P4R8 1299 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 HHIPL2Q6UWX4 724 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 MAATS1Q7Z4T9 603 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 AGBL1Q96MI9 1066 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 NOX5Q96PH1 765 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 TCHPQ9BT92 498 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 GLIS2Q9BZE0 524 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 BCAS3Q9H6U6 928 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 BLOC1S4Q9NUP1 217 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 FAM198AQ9UFP1 575 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 PCDHA13Q9Y5I0 950 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 SMIM23A6NLE4 172 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 K7ENM7 598 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 GFPT2O94808 682 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 CKAP4Q07065 602 aaKnown RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 TBX2Q13207 712 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-217ENST00000584582 KCNB1Q14721 858 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 NBPF9Q3BBW0 867 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 FAM102BQ5T8I3 360 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 CATSPER3Q86XQ3 398 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 ELMO3Q96BJ8 720 aa12.43□□□□□ -0.42
TOP3A-217ENST00000584582 KCNK3O14649 394 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 EPHB6O15197 1021 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 GCFC2P16383 781 aaKnown RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 KCNH2Q12809 1159 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 SAMD7Q7Z3H4 446 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 IRF2BP1Q8IU81 584 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 LRRC15Q8TF66 581 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 RABGGTAQ92696 567 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 REEP2Q9BRK0 252 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 MMTAG2Q9BU76 263 aaKnown RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 FGFBP2Q9BYJ0 223 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 PDS5AQ29RF7 1337 aaKnown RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 ESYT3A0FGR9 886 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 HOXA10P31260 410 aaPredicted RBP12.42□□□□□ -0.42
TOP3A-217ENST00000584582 MAP3K9P80192 1104 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 SPP2Q13103 211 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 CCDC93Q567U6 631 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 GJB7Q6PEY0 223 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 MMS19Q96T76 1030 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 C7orf25Q9BPX7 421 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 MYO1AQ9UBC5 1043 aa12.42□□□□□ -0.42
TOP3A-217ENST00000584582 KLRC4O43908 158 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms