RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 CCDC178Q5BJE1 867 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 HAUS3Q68CZ6 603 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 MAGEC3Q8TD91 643 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 NSMCE1Q8WV22 266 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 LMBR1Q8WVP7 490 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 CAVIN3Q969G5 261 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 EPSTI1Q96J88 318 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 MKNK2Q9HBH9 465 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 VPS54Q9P1Q0 977 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 SNX12Q9UMY4 172 aa14.02□□□□□ -0.17
ITGB4-212ENST00000584558 hCG_1642624A0A1W2PR95 340 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 FAM153BP0C7A2 387 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 GRM4Q14833 912 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 FAM153CQ494X1 144 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 TCP11X2Q5H9J9 407 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 WDR59Q6PJI9 974 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 STAMBPL1Q96FJ0 436 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 PAGE5Q96GU1 130 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 FAM153AQ9UHL3 310 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 MAPK8IP1Q9UQF2 711 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 ADCY2Q08462 1091 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 KCNB1Q14721 858 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 NFRKBQ6P4R8 1299 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 PNMA1Q8ND90 353 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 NOC3LQ8WTT2 800 aaKnown RBP14.01□□□□□ -0.17
ITGB4-212ENST00000584558 ATP6V1G3Q96LB4 118 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 EYA3Q99504 573 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 BLZF1Q9H2G9 400 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 ETAA1Q9NY74 926 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 GGA2Q9UJY4 613 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 ZSCAN5CA6NGD5 496 aaPredicted RBP14.01□□□□□ -0.17
ITGB4-212ENST00000584558 H0YIN7 160 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 TSPY3P0CV98 308 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 TSPY8P0CW00 308 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 CYLC1P35663 651 aaPredicted RBP14.01□□□□□ -0.17
ITGB4-212ENST00000584558 CARSP49589 748 aaKnown RBP14.01□□□□□ -0.17
ITGB4-212ENST00000584558 IFFO1Q0D2I5 559 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 KIF5AQ12840 1032 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 QPCTQ16769 361 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 SLC35G1Q2M3R5 365 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 RILPL1Q5EBL4 403 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 NEDD1Q8NHV4 660 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 NOD2Q9HC29 1040 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 MAD2L2Q9UI95 211 aa14.01□□□□□ -0.17
ITGB4-212ENST00000584558 PLIN4Q96Q06 1357 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 GABPAQ06546 454 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 SPAG1Q07617 926 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 CCDC96Q2M329 555 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 EARS2Q5JPH6 523 aaKnown RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 HHIPL2Q6UWX4 724 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 IQCKQ8N0W5 287 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 ZNF444Q8N0Y2 327 aaPredicted RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 DDX4Q9NQI0 724 aaKnown RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 SRPRBQ9Y5M8 271 aaKnown RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 ATP6V1G2O95670 118 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 PFKFB3Q16875 520 aaPredicted RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 HIBCHQ6NVY1 386 aaPredicted RBP14□□□□□ -0.17
ITGB4-212ENST00000584558 PODNQ7Z5L7 613 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 MAB21L3Q8N8X9 362 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 MICAL1Q8TDZ2 1067 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 TATDN2Q93075 761 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 SAAL1Q96ER3 474 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 KCNQ5Q9NR82 932 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 CAPN6Q9Y6Q1 641 aa14□□□□□ -0.17
ITGB4-212ENST00000584558 GREB1LQ9C091 1923 aaPredicted RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 SIPA1L1O43166 1804 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 GMNCA6NCL1 334 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 VEGFAP15692 232 aaPredicted RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 KIF5BP33176 963 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 PTGER2P43116 358 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 FKBP1AP62942 108 aaKnown RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 ITGB3BPQ13352 177 aaPredicted RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 PPP1R7Q15435 360 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 STAG2Q8N3U4 1231 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 HOOK2Q96ED9 719 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 GSDMAQ96QA5 445 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 DNAJC7Q99615 494 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 CPSF2Q9P2I0 782 aaKnown RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 MYH10P35580 1976 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 FAM205CA6NFA0 338 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 F8W031 263 aaPredicted RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 MPHOSPH10O00566 681 aaKnown RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 SCG2P13521 617 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 XBP1P17861 261 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 KRT2P35908 639 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 PAK1Q13153 545 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 APOBEC3HQ6NTF7 200 aaKnown RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 CACNA2D3Q8IZS8 1091 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 RUBCNQ92622 972 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 SEC16BQ96JE7 1060 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 NHEJ1Q9H9Q4 299 aaPredicted RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 EPB41L5Q9HCM4 733 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 RBM12Q9NTZ6 932 aaKnown RBP13.99□□□□□ -0.17
ITGB4-212ENST00000584558 LRWD1Q9UFC0 647 aa13.99□□□□□ -0.17
ITGB4-212ENST00000584558 C10orf71Q711Q0 1435 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 GOLGA6L10A6NI86 522 aa13.98□□□□□ -0.17
ITGB4-212ENST00000584558 LRRC10BA6NIK2 292 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms