RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 HSD17B4P51659 736 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HIC1Q14526 733 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HSDL1Q3SXM5 330 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 LEXMQ3ZCV2 418 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MYSM1Q5VVJ2 828 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MB21D2Q8IYB1 491 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 DBF4BQ8NFT6 615 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CTCFLQ8NI51 663 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MLXIPQ9HAP2 919 aa15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 NAP1L2Q9ULW6 460 aaPredicted RBP15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TCF20Q9UGU0 1960 aaKnown RBP15.14■□□□□ 0.01
CDK5RAP3-234ENST00000584525 C17orf102A2RUQ5 167 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 OPLAHO14841 1288 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 RGS20O76081 388 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HOXD8P13378 290 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HOXA13P31271 388 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SSTR3P32745 418 aaPredicted RBP15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 KIF5BP33176 963 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 VSIG10LQ86VR7 867 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GJD3Q8N144 294 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 STAG2Q8N3U4 1231 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 ATP6V0A1Q93050 837 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MTA3Q9BTC8 594 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 C11orf16Q9NQ32 467 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PCDHA1Q9Y5I3 950 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TAF6LQ9Y6J9 622 aa15.13■□□□□ 0.01
CDK5RAP3-234ENST00000584525 KLRF2D3W0D1 207 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 EPB41L2O43491 1005 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CALM1P0DP23 149 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CALM2P0DP24 149 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CALM3P0DP25 149 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 UBA1P22314 1058 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CCND2P30279 289 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SP2Q02086 613 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PGM5Q15124 567 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SEC23AQ15436 765 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PTPROQ16827 1216 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 BLOC1S2Q6QNY1 142 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SERINC5Q86VE9 423 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SEPT8Q92599 483 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MRPL38Q96DV4 380 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 ZFP91Q96JP5 570 aaPredicted RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 JAKMIP1Q96N16 626 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 YME1L1Q96TA2 773 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 C16orf70Q9BSU1 422 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MAP3K20Q9NYL2 800 aaKnown RBP15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SLC12A7Q9Y666 1083 aa15.12■□□□□ 0.01
CDK5RAP3-234ENST00000584525 H3BRB1 525 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GCOM1H8Y6P7 765 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SH2B2O14492 632 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 ZBTB5O15062 677 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PPP1R11O60927 126 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 DDAH1O94760 285 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 UPP2O95045 317 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 POLR2MP0CAP2 368 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TGFB3P10600 412 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 EPC2Q52LR7 807 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PLEKHG4Q58EX7 1191 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PTCRAQ6ISU1 281 aaPredicted RBP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 FCHSD1Q86WN1 690 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HOMER1Q86YM7 354 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 FAM178BQ8IXR5 827 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 ZNF654Q8IZM8 581 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 IL31RAQ8NI17 732 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GPKOWQ92917 476 aaPredicted RBP eCLIP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 LRRC2Q9BYS8 371 aa15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TUT1Q9H6E5 874 aaKnown RBP15.11■□□□□ 0.01
CDK5RAP3-234ENST00000584525 H3BQ06 376 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TREHO43280 583 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 CTSHP09668 335 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SMIM10L2AP0DMW4 78 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SMIM10L2BP0DMW5 78 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 IL9P15248 144 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HSPA4P34932 840 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 ANTXR2P58335 489 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 HTRA4P83105 476 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GHRHRQ02643 423 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TRAF1Q13077 416 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 EP400NLQ6ZTU2 488 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 DHX32Q7L7V1 743 aaKnown RBP15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SAMD3Q8N6K7 520 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SP7Q8TDD2 431 aaPredicted RBP15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MTMR8Q96EF0 704 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 SAMD11Q96NU1 681 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 LY9Q9HBG7 655 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MAD2L2Q9UI95 211 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TANC1Q9C0D5 1861 aa15.1■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GRXCR2A6NFK2 248 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 NOP56O00567 594 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 LGALS2P05162 132 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GNAQP50148 359 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 MKRN4PQ13434 485 aaPredicted RBP15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GPM6BQ13491 265 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 GRM4Q14833 912 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 PUS10Q3MIT2 529 aaKnown RBP15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TIGD5Q53EQ6 642 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 IGDCC4Q8TDY8 1250 aa15.09■□□□□ 0.01
CDK5RAP3-234ENST00000584525 TOP1MTQ969P6 601 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms