RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 UIMC1Q96RL1 719 aa28.4■■■□□ 2.14
TTC39C-209ENST00000584250 PPP1R12CQ9BZL4 782 aa28.4■■■□□ 2.14
TTC39C-209ENST00000584250 KCNJ14Q9UNX9 436 aa28.4■■■□□ 2.14
TTC39C-209ENST00000584250 RBAK-RBAKDNI3L0D1 243 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 GNA11P29992 359 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 EPHB4P54760 987 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 GPR20Q99678 358 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 SENP7Q9BQF6 1050 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 C16orf70Q9BSU1 422 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 ALG1Q9BT22 464 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 KCNH7Q9NS40 1196 aa28.39■■■□□ 2.14
TTC39C-209ENST00000584250 FAM86B1E9PN63 330 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 TLR3O15455 904 aaKnown RBP28.38■■■□□ 2.13
TTC39C-209ENST00000584250 PPFIA4O75335 1185 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 F2P00734 622 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 FAM86B2P0C5J1 330 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 CYP2C9P11712 490 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 PSEN2P49810 448 aa28.38■■■□□ 2.13
TTC39C-209ENST00000584250 HAS3O00219 553 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 JAK2O60674 1132 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 CDKL5O76039 1030 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 CYP2C18P33260 490 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 MFSD10Q14728 455 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 CEP55Q53EZ4 464 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 NFRKBQ6P4R8 1299 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 TRIM50Q86XT4 487 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 NSUN7Q8NE18 718 aaKnown RBP28.37■■■□□ 2.13
TTC39C-209ENST00000584250 CTAGE1Q96RT6 745 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 ORC3Q9UBD5 711 aaPredicted RBP28.37■■■□□ 2.13
TTC39C-209ENST00000584250 STK36Q9NRP7 1315 aa28.37■■■□□ 2.13
TTC39C-209ENST00000584250 MEIS1O00470 390 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 TIMP1P01033 207 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 LGALS2P05162 132 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 HIC1Q14526 733 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 KIAA0753Q2KHM9 967 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 HDAC6Q9UBN7 1215 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 PCDHA4Q9UN74 947 aa28.36■■■□□ 2.13
TTC39C-209ENST00000584250 IGLV3-22A0A075B6J6 115 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 M0R2N6 131 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 NOP56O00567 594 aaKnown RBP28.35■■■□□ 2.13
TTC39C-209ENST00000584250 CYP3A4P08684 503 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 ITGB3BPQ13352 177 aaPredicted RBP28.35■■■□□ 2.13
TTC39C-209ENST00000584250 C9orf50Q5SZB4 431 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 GDF6Q6KF10 455 aaPredicted RBP28.35■■■□□ 2.13
TTC39C-209ENST00000584250 BICD2Q8TD16 824 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 CDHR1Q96JP9 859 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 NOC4LQ9BVI4 516 aaKnown RBP28.35■■■□□ 2.13
TTC39C-209ENST00000584250 LIMCH1Q9UPQ0 1083 aa28.35■■■□□ 2.13
TTC39C-209ENST00000584250 ZNF76P36508 570 aa28.34■■■□□ 2.13
TTC39C-209ENST00000584250 UTP14CQ5TAP6 766 aaKnown RBP28.34■■■□□ 2.13
TTC39C-209ENST00000584250 BLIDQ8IZY5 108 aa28.34■■■□□ 2.13
TTC39C-209ENST00000584250 SEZ6LQ9BYH1 1024 aa28.34■■■□□ 2.13
TTC39C-209ENST00000584250 AGO4Q9HCK5 861 aaKnown RBP28.34■■■□□ 2.13
TTC39C-209ENST00000584250 GSTTP1A0A1W2PQM5 241 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 SOX1O00570 391 aaPredicted RBP28.33■■■□□ 2.13
TTC39C-209ENST00000584250 FXR1P51114 621 aaKnown RBP eCLIP28.33■■■□□ 2.13
TTC39C-209ENST00000584250 ZNF200P98182 395 aaPredicted RBP28.33■■■□□ 2.13
TTC39C-209ENST00000584250 PLA2G4DQ86XP0 818 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 DAGLBQ8NCG7 672 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 PHF20Q9BVI0 1012 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 WNT8AQ9H1J5 351 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 HIPK3Q9H422 1215 aa28.33■■■□□ 2.13
TTC39C-209ENST00000584250 TRIP12Q14669 1992 aaPredicted RBP28.33■■■□□ 2.13
TTC39C-209ENST00000584250 MAFGO15525 162 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 FOSBP53539 338 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 SHHQ15465 462 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 MFSD5Q6N075 450 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 CCDC83Q8IWF9 413 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 TDHQ8IZJ6 230 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 OXER1Q8TDS5 423 aa28.32■■■□□ 2.12
TTC39C-209ENST00000584250 H3BRB1 525 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 CSF2RAP15509 400 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 TCF7P36402 384 aaPredicted RBP28.31■■■□□ 2.12
TTC39C-209ENST00000584250 CCL23P55773 120 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 PTPN11Q06124 597 aaPredicted RBP28.31■■■□□ 2.12
TTC39C-209ENST00000584250 MCTP2Q6DN12 878 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 SESTD1Q86VW0 696 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 GIMAP8Q8ND71 665 aaPredicted RBP28.31■■■□□ 2.12
TTC39C-209ENST00000584250 TUT1Q9H6E5 874 aaKnown RBP28.31■■■□□ 2.12
TTC39C-209ENST00000584250 GTF2IRD1Q9UHL9 959 aa28.31■■■□□ 2.12
TTC39C-209ENST00000584250 A0A1W2PPC1 479 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 FPGSQ05932 587 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 PTGISQ16647 500 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 C16orf59Q7L2K0 433 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 NIPA1Q7RTP0 329 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 C7orf31Q8N865 590 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 TBCKQ8TEA7 893 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 LENG9Q96B70 501 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 TBC1D32Q96NH3 1257 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 KATNAL1Q9BW62 490 aa28.3■■■□□ 2.12
TTC39C-209ENST00000584250 DDX39AO00148 427 aaKnown RBP28.29■■■□□ 2.12
TTC39C-209ENST00000584250 DHX15O43143 795 aaKnown RBP28.29■■■□□ 2.12
TTC39C-209ENST00000584250 CD2BP2O95400 341 aaKnown RBP28.29■■■□□ 2.12
TTC39C-209ENST00000584250 CIITAP33076 1130 aa28.29■■■□□ 2.12
TTC39C-209ENST00000584250 DHX38Q92620 1227 aaKnown RBP28.29■■■□□ 2.12
TTC39C-209ENST00000584250 VWCEQ96DN2 955 aa28.29■■■□□ 2.12
TTC39C-209ENST00000584250 SCLYQ96I15 445 aa28.29■■■□□ 2.12
TTC39C-209ENST00000584250 PCYT2Q99447 389 aa28.29■■■□□ 2.12
TTC39C-209ENST00000584250 JPH1Q9HDC5 661 aaPredicted RBP28.29■■■□□ 2.12
TTC39C-209ENST00000584250 SLC9A2Q9UBY0 812 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms