RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 POLR2MP0CAP2 368 aa18.08■□□□□ 0.48
SKA2-209ENST00000583976 TROAPQ12815 778 aa18.08■□□□□ 0.48
SKA2-209ENST00000583976 SEMA3FQ13275 785 aa18.08■□□□□ 0.48
SKA2-209ENST00000583976 MKRN4PQ13434 485 aaPredicted RBP18.08■□□□□ 0.48
SKA2-209ENST00000583976 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
SKA2-209ENST00000583976 RASEFQ8IZ41 740 aa18.08■□□□□ 0.48
SKA2-209ENST00000583976 USP26Q9BXU7 913 aa18.08■□□□□ 0.48
SKA2-209ENST00000583976 LINC01553A4QN01 128 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 SEC24BO95487 1268 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 LGALS2P05162 132 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 CTSHP09668 335 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 THPOP40225 353 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 MRPS9P82933 396 aaKnown RBP18.07■□□□□ 0.48
SKA2-209ENST00000583976 WTAPQ15007 396 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 SERINC5Q86VE9 423 aa18.07■□□□□ 0.48
SKA2-209ENST00000583976 ABHD14A-ACY1A0A1B0GW23 586 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 LGR5O75473 907 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 SMIM10L2AP0DMW4 78 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 SMIM10L2BP0DMW5 78 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 HOXC8P31273 242 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 HSPA4P34932 840 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 C8orf34Q49A92 452 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 SUGCTQ9HAC7 445 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 ATG2AQ2TAZ0 1938 aa18.06■□□□□ 0.48
SKA2-209ENST00000583976 TREHO43280 583 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 PPFIA4O75335 1185 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 PARNO95453 639 aaKnown RBP18.05■□□□□ 0.48
SKA2-209ENST00000583976 SP4Q02446 784 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 AAK1Q2M2I8 961 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 ADCK5Q3MIX3 580 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 MB21D2Q8IYB1 491 aaPredicted RBP18.05■□□□□ 0.48
SKA2-209ENST00000583976 MYOCDQ8IZQ8 938 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 DBF4BQ8NFT6 615 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 MLXIPQ9HAP2 919 aa18.05■□□□□ 0.48
SKA2-209ENST00000583976 MAP3K20Q9NYL2 800 aaKnown RBP18.05■□□□□ 0.48
SKA2-209ENST00000583976 NLRC5Q86WI3 1866 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 PNMA6FA0A0J9YX94 578 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 ERICH2A1L162 156 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 C17orf102A2RUQ5 167 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 ERVK-21P61565 698 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 IKBKEQ14164 716 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 KCNV1Q6PIU1 500 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 ATP6V0A1Q93050 837 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 INPP4AQ96PE3 977 aaPredicted RBP18.04■□□□□ 0.48
SKA2-209ENST00000583976 TGS1Q96RS0 853 aaKnown RBP18.04■□□□□ 0.48
SKA2-209ENST00000583976 RAD9AQ99638 391 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 RTEL1Q9NZ71 1219 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 SNX14Q9Y5W7 946 aa18.04■□□□□ 0.48
SKA2-209ENST00000583976 RSPH10B2B2RC85 870 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 H3BRB1 525 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 NOP56O00567 594 aaKnown RBP18.03■□□□□ 0.48
SKA2-209ENST00000583976 PLEKHA8P1O95397 391 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 RSPH10BP0C881 870 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 USP17L6PQ6QN14 398 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 CYFIP1Q7L576 1253 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 RAB11FIP4Q86YS3 637 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 ZNF654Q8IZM8 581 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 KHSRPQ92945 711 aaKnown RBP eCLIP18.03■□□□□ 0.489e-7■■■■□ 21.9
SKA2-209ENST00000583976 HLA-CQ95604 372 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 NEK1Q96PY6 1258 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 GPR20Q99678 358 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 TUT1Q9H6E5 874 aaKnown RBP18.03■□□□□ 0.48
SKA2-209ENST00000583976 LY9Q9HBG7 655 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 COG5Q9UP83 839 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
SKA2-209ENST00000583976 EMSYQ7Z589 1322 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 EPB41L2O43491 1005 aaKnown RBP18.02■□□□□ 0.48
SKA2-209ENST00000583976 PRC1O43663 620 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 EFCAB14O75071 495 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 TGFB3P10600 412 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 RXRAP19793 462 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 KRT32Q14532 448 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 TSGA10IPQ3SY00 556 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 GNPTABQ3T906 1256 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 PLEKHG4Q58EX7 1191 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 UTP14CQ5TAP6 766 aaKnown RBP18.02■□□□□ 0.48
SKA2-209ENST00000583976 METTL7BQ6UX53 244 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 CATIPQ7Z7H3 387 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 SAMD3Q8N6K7 520 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 IGDCC4Q8TDY8 1250 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 KCNB2Q92953 911 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 RNPEPQ9H4A4 650 aa18.02■□□□□ 0.48
SKA2-209ENST00000583976 SPATA31C2B4DYI2 1134 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 FIBPO43427 364 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 ICAM3P32942 547 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 MCM5P33992 734 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 SART3Q15020 963 aaKnown RBP18.01■□□□□ 0.47
SKA2-209ENST00000583976 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
SKA2-209ENST00000583976 LMBR1Q8WVP7 490 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 JAKMIP1Q96N16 626 aaKnown RBP18.01■□□□□ 0.47
SKA2-209ENST00000583976 LRRC2Q9BYS8 371 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 SETD4Q9NVD3 440 aa18.01■□□□□ 0.47
SKA2-209ENST00000583976 EIF5BO60841 1220 aaKnown RBP18■□□□□ 0.47
SKA2-209ENST00000583976 DDAH1O94760 285 aa18■□□□□ 0.47
SKA2-209ENST00000583976 AMHP03971 560 aa18■□□□□ 0.47
SKA2-209ENST00000583976 CPA1P15085 419 aa18■□□□□ 0.47
SKA2-209ENST00000583976 HTRA4P83105 476 aaPredicted RBP18■□□□□ 0.47
SKA2-209ENST00000583976 FBXO22Q8NEZ5 403 aa18■□□□□ 0.47
SKA2-209ENST00000583976 SP7Q8TDD2 431 aaPredicted RBP18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms