RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 ATP9AO75110 1047 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CCL5P13501 91 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 TECP42680 631 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 GJA8P48165 433 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 FXR2P51116 673 aaKnown RBP eCLIP18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PDIA5Q14554 519 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CCL14Q16627 93 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 CHRDL2Q6WN34 429 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 EEPD1Q7L9B9 569 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 UBE2Q1Q7Z7E8 422 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 KATNBL1Q9H079 304 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 TTC12Q9H892 705 aaPredicted RBP18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 VTA1Q9NP79 307 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 PCDHA12Q9UN75 941 aa18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 RANBP2P49792 3224 aaKnown RBP18.46■□□□□ 0.55
CDK5RAP3-228ENST00000583363 A0A1W2PQ27 194 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 A0A1W2PQ64 194 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 A0A1W2PQD8 194 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 RBM47A0AV96 593 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 IPO5O00410 1097 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 DHX15O43143 795 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PSMD10O75832 226 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 GJB1P08034 283 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TGFB3P10600 412 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 LONP1P36776 959 aaKnown RBP18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 IRF5Q13568 498 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 NFKBIBQ15653 356 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TAPT1Q6NXT6 567 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 KCNV1Q6PIU1 500 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 DPF3Q92784 378 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 RIT2Q99578 217 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CSRNP2Q9H175 543 aa18.45■□□□□ 0.54
CDK5RAP3-228ENST00000583363 GOLGA6L4A6NEF3 574 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 DDX11L8A8MPP1 907 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 KCNA2P16389 499 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CMA1P23946 247 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 UBE2HP62256 183 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SP2Q02086 613 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 ITGB3BPQ13352 177 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 ACVR2BQ13705 512 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TMEM266Q2M3C6 531 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 LRCH2Q5VUJ6 765 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SHC4Q6S5L8 630 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 FBXO16Q8IX29 292 aaPredicted RBP18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TRMT44Q8IYL2 757 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 IGSF22Q8N9C0 903 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SENP7Q9BQF6 1050 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 RNF208Q9H0X6 261 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 ABHD16BQ9H3Z7 469 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PDGFCQ9NRA1 345 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TBC1D22BQ9NU19 505 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 DDX41Q9UJV9 622 aaKnown RBP18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 VAV3Q9UKW4 847 aa18.44■□□□□ 0.54
CDK5RAP3-228ENST00000583363 MCM3APO60318 1980 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CCDC62Q6P9F0 684 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 B3GNT9Q6UX72 402 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PKD2L1Q9P0L9 805 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 NFASCO94856 1347 aa18.43■□□□□ 0.54
CDK5RAP3-228ENST00000583363 GAS7O60861 476 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CYP2C19P33261 490 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SPIRE1Q08AE8 756 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PPP2R5CQ13362 524 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TPRNQ4KMQ1 711 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PRAMEF19Q5SWL8 479 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 RESP18Q5W5W9 173 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 AK8Q96MA6 479 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TEKT3Q9BXF9 490 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 RAB34Q9BZG1 259 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 BCAS3Q9H6U6 928 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 KIAA1217Q5T5P2 1943 aa18.42■□□□□ 0.54
CDK5RAP3-228ENST00000583363 FAM237AA0A1B0GTK4 181 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 ARIH2O95376 493 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 ZNF865P0CJ78 1059 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PTMSP20962 102 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 NEDD9Q14511 834 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TTLL4Q14679 1199 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 LY6KQ17RY6 165 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 MFSD14CQ5VZR4 134 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 IQSEC1Q6DN90 963 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 USP49Q70CQ1 688 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 GIMAP8Q8ND71 665 aaPredicted RBP18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SLAIN1Q8ND83 568 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 U2AF1L4Q8WU68 220 aaKnown RBP18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SCFD2Q8WU76 684 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TRIB2Q92519 343 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 EPSTI1Q96J88 318 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SDF4Q9BRK5 362 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 UNC93B1Q9H1C4 597 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 LRWD1Q9UFC0 647 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 NRBP1Q9UHY1 535 aa18.41■□□□□ 0.54
CDK5RAP3-228ENST00000583363 POTEMA6NI47 508 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 EML1O00423 815 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 TXNP10599 105 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CDC25AP30304 524 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 FSIP1Q8NA03 581 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 PXYLP1Q8TE99 480 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 SYMPKQ92797 1274 aaKnown RBP18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 HTATIP2Q9BUP3 242 aa18.4■□□□□ 0.54
CDK5RAP3-228ENST00000583363 CCSER1Q9C0I3 900 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms