RNA–Protein interactions for RNA: ENST00000582513.5

TRAPPC8-210, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 3,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-210ENST00000582513 ZNF473Q8WTR7 871 aaKnown RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 MKNK2Q9HBH9 465 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 ATP8A2Q9NTI2 1148 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRIM10Q9UDY6 481 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CCDC194A0A1B0GVG4 234 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 SHOX2O60902 331 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 MRPS25P82663 173 aaKnown RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CNGA4Q8IV77 575 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 MSANTD4Q8NCY6 345 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 SH3RF3Q8TEJ3 882 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 COG1Q8WTW3 980 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRIM11Q96F44 468 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 SETDB2Q96T68 719 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 CDCA7Q9BWT1 371 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 NACA2Q9H009 215 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 ABHD10Q9NUJ1 306 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 ZFATQ9P243 1243 aa16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC8-210ENST00000582513 EIF4BP23588 611 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 HPDP32754 393 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 GCLCP48506 637 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 SPATS2Q86XZ4 545 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 C4orf32Q8N8J7 132 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 RWDD2AQ9UIY3 292 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 GRIN2DO15399 1336 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 PCP11498 1178 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 ZNF658Q5TYW1 1059 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 AMIGO3Q86WK7 504 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 CENPOQ9BU64 300 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 PPP1R12CQ9BZL4 782 aa16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 ZNHIT6Q9NWK9 470 aaKnown RBP16.93■□□□□ 0.3
TRAPPC8-210ENST00000582513 PREBQ9HCU5 417 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 LIMA1Q9UHB6 759 aaKnown RBP16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 CYTH3O43739 400 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 EVI5O60447 810 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 PCK1P35558 622 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 SLC7A5Q01650 507 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 NAALADL2Q58DX5 795 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 TGFBRAP1Q8WUH2 860 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 FAM81BQ96LP2 452 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 NAA15Q9BXJ9 866 aaKnown RBP16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 USH1CQ9Y6N9 552 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 A0A1B0GUL6 1792 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 DTHD1Q6ZMT9 781 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 IRF2BP1Q8IU81 584 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 LRRC15Q8TF66 581 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 FAM163AQ96GL9 167 aaPredicted RBP16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRAIPQ9BWF2 469 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 PCDHA4Q9UN74 947 aa16.92■□□□□ 0.3
TRAPPC8-210ENST00000582513 ATP6V1G2O95670 118 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRAPPC10P48553 1259 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TBC1D1Q86TI0 1168 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 MAPKAPK5Q8IW41 473 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 CCT8L2Q96SF2 557 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRIM7Q9C029 511 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 DISC1Q9NRI5 854 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 SEMA3EO15041 775 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 GNPATO15228 680 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TSPY3P0CV98 308 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TSPY8P0CW00 308 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.91■□□□□ 0.32e-7■□□□□ 11.1
TRAPPC8-210ENST00000582513 SELENOOQ9BVL4 669 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 NOP53Q9NZM5 478 aaKnown RBP16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 LNPEPQ9UIQ6 1025 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 DPPA5A6NC42 116 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 CALML3P27482 149 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 UBA7P41226 1012 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 MYBPC3Q14896 1274 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TAF11Q15544 211 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 C12orf60Q5U649 245 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 GPIHBP1Q8IV16 184 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 ABTB1Q969K4 478 aaPredicted RBP16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 ZNF570Q96NI8 536 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 GUCA1BQ9UMX6 200 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 PCDHA6Q9UN73 950 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 PCDHA8Q9Y5H6 950 aa16.91■□□□□ 0.3
TRAPPC8-210ENST00000582513 TTC26A0AVF1 554 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 APBA1Q02410 837 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 NANOGNBQ7Z5D8 188 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 ARL8AQ96BM9 186 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 MAD2L2Q9UI95 211 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 DNM1LO00429 736 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 LSP1P33241 339 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 IFFO1Q0D2I5 559 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 TMTC1Q8IUR5 882 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 CCDC170Q8IYT3 715 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 TRIM47Q96LD4 638 aa16.9■□□□□ 0.3
TRAPPC8-210ENST00000582513 SPATA31A5Q5VU36 1347 aa16.89■□□□□ 0.3
TRAPPC8-210ENST00000582513 SPATA31A7Q8IWB4 1347 aa16.89■□□□□ 0.3
TRAPPC8-210ENST00000582513 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.29
TRAPPC8-210ENST00000582513 SPDYE5A6NIY4 337 aa16.89■□□□□ 0.29
TRAPPC8-210ENST00000582513 LDHBP07195 334 aaKnown RBP16.89■□□□□ 0.29
TRAPPC8-210ENST00000582513 IGBP1P78318 339 aa16.89■□□□□ 0.29
TRAPPC8-210ENST00000582513 SBK1Q52WX2 424 aa16.89■□□□□ 0.29
TRAPPC8-210ENST00000582513 NUGGCQ68CJ6 796 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms